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Add singlem to the pipeline #84

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danilodileo opened this issue Oct 8, 2024 · 0 comments
Open

Add singlem to the pipeline #84

danilodileo opened this issue Oct 8, 2024 · 0 comments
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enhancement New feature or request
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Magmap 1.0.1

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Description of feature

We should add singleM to the pipeline in order to assess the proprortion of microbial fraction in the samples.
It would be good to have the module after bbduk so we avoid to count in the proportion the rRNAs.
@danilodileo danilodileo added the enhancement New feature or request label Oct 8, 2024
@danilodileo danilodileo added this to the Magmap 1.0.1 milestone Oct 8, 2024
@danilodileo danilodileo self-assigned this Oct 8, 2024
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enhancement New feature or request
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Magmap 1.0.1
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