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We currently use the test-profiles for the metagenomics profilers just as a technical test, that the pipeline runs smootly. But the output is always empty, because the current test-input data (mammoth) and test-databases for the metagenomics profiler tools (bacterial) dont match.
Approach
We should either provide a test-file that has some bacterial reads retained after host-removal or update the test-databases to have some "real" tables produced as output after the end of the respective test-runs.
The text was updated successfully, but these errors were encountered:
Problem
We currently use the test-profiles for the metagenomics profilers just as a technical test, that the pipeline runs smootly. But the output is always empty, because the current test-input data (mammoth) and test-databases for the metagenomics profiler tools (bacterial) dont match.
Approach
We should either provide a test-file that has some bacterial reads retained after host-removal or update the test-databases to have some "real" tables produced as output after the end of the respective test-runs.
The text was updated successfully, but these errors were encountered: