From 51930ca2a07814c4641684dfab42331bc61601ab Mon Sep 17 00:00:00 2001 From: Davi Marcon Date: Wed, 4 Oct 2023 18:08:56 -0300 Subject: [PATCH] scratching of sabmi-iec config profile --- conf/sabmi_iec | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) create mode 100644 conf/sabmi_iec diff --git a/conf/sabmi_iec b/conf/sabmi_iec new file mode 100644 index 000000000..acc877186 --- /dev/null +++ b/conf/sabmi_iec @@ -0,0 +1,23 @@ +params { + config_profile_description = 'Bacteriology session of Instituto Evandro Chagas cluster profile provided by nf-core/configs.' + config_profile_contact = 'Davi Marcon - @Mxrcon - davijosuemarcon@gmail.com' + + max_cpus = 12 + max_memory = 48.GB + max_time = 72.h + +} + +docker { + enabled = true + runOptions = "-u root" +} + +process { + executor = 'pbs' + pollInterval = '5 sec' + queueSize = '10' + clusterOptions = {"-l nodes=1:hpcnod16:ppn=${task.cpus}"} + queue = "sabmi" + } +} \ No newline at end of file