diff --git a/README.md b/README.md index 354fd71..2d82b73 100644 --- a/README.md +++ b/README.md @@ -31,23 +31,23 @@ User guide: https://mesmerize-core.readthedocs.io/en/latest/user_guide.html For visualization we recommend [`mesmerize-viz`](https://github.com/kushalkolar/mesmerize-viz) which contains a standard set of visualizations (a WIP), or [`fastplotlib`](https://github.com/kushalkolar/fastplotlib). Here are some examples of visualizations using `fastplotlib`, these visualizations are all performed within jupyter notebooks therefore they will also work on cloud computing intrastructure! -View raw and motion corrected movie side by side: +### View raw and motion corrected movie side by side: https://user-images.githubusercontent.com/9403332/191207398-39a027d7-079e-475b-baec-381f2d271652.mp4 -Contours from CNMF, good components in cyan and bad components in magenta: +### Contours from CNMF, good components in cyan and bad components in magenta: https://user-images.githubusercontent.com/9403332/191207461-9c5c4cad-867b-413a-b30b-ea61f010eed6.mp4 -Input movie, constructed movie `(A * C)`, residuals `(Y - A * C - b * f)`, and reconstructed background (b * f): +### Input movie, constructed movie `(A * C)`, residuals `(Y - A * C - b * f)`, and reconstructed background `(b * f)`: https://user-images.githubusercontent.com/9403332/191207782-566e24bc-7f0d-40a3-9442-37c86d0ebe48.mp4 -Interactive Component evaluation after CNMF: +### Interactive Component evaluation after CNMF: https://user-images.githubusercontent.com/9403332/191207883-2393664d-b5e1-49a5-84d1-8ed7eadcf7a0.mp4 -This is all possible within jupyter notebooks using `fastplotlib`! +### This is all possible within jupyter notebooks using `fastplotlib`! # Installation