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Updated Tips and tricks (markdown)
Add link to annotation_format option
Fix another bug in example code
Fix bug in example code
More changes for -a option
Added link to GitHub issue 55
missing ``` ruined rendering
Fix a missed option to grep
Updated and modified using --name Added in some comments to shell script to explain what is going on.
Changed tips to use --name option (PD-3671)
Added links to perl for RAST updates
Link to issue # 24
Updated for 3.9.8 (TMPDIR)
Update to include the answer to @jdmccauley
Updated links for Prokka GFF file handling
Interim commit of moving Prokka GFF fix Move from Running AMRFinderPlus to Tips and Tricks
Cleaned up
Merge branch 'master' of https://github.com/evolarjun/amr.wiki Conflicts: Tips-and-tricks.md
Finished tip for filtering based on column
F
In progress addtion of filtering output
In progress updates for filtering
small formatting change
More specifics
Added a couple of more tricks