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demultiplexed fastq files are 0 reads #19

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Leran10 opened this issue Sep 25, 2023 · 0 comments

Leran10 commented Sep 25, 2023

Hi,

I used the Sabre to demultiplex data but no matter if I add -c parameter or not, the output demultiplexed fastq files are only 0 reads.

The first column is the size of the file which are all 0.

But the unmached R1 amd R2 fastq files seem large:

Does this mean there is something wrong with my barcode mapping file, or can be some parameter issues that I have not addressed yet?

Thanks!
Leran

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