Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Transpositions with substitutions at the very start or end #18

Open
jkvis opened this issue Jun 19, 2017 · 0 comments
Open

Transpositions with substitutions at the very start or end #18

jkvis opened this issue Jun 19, 2017 · 0 comments

Comments

@jkvis
Copy link
Member

jkvis commented Jun 19, 2017

Probably these substitutions need to be lifted out of the transposition e.g.
42_43ins[CA;19_42] to [42_43insCA;ins43_44[19_42]].

ref = ATGGCGGCGGTGGTCGCCCTCTCCTTGAGGCGCCGGTTGCCGGCCACAACCCTTGGCGGA
alt = ATGGCGGCGGTGGTCGCCCTCTCCTTGAGGCGCCGGTTGCCGCACTCTCCTTGAGGCGCCGGTTGCCGGCCACAACCCTTGGCGGA

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant