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Export pheval TSV results as zstd compressed parquet #385

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julesjacobsen opened this issue Jan 17, 2025 · 0 comments
Open

Export pheval TSV results as zstd compressed parquet #385

julesjacobsen opened this issue Jan 17, 2025 · 0 comments

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@julesjacobsen
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This could save a significant amount of disc space:

ll nan_individualII5-pheval_gene_result.*
-rw-rw-r-- 1 jules jules  739906 Jan 17 11:37 nan_individualII5-pheval_gene_result.parquet
-rw-rw-r-- 1 jules jules  453984 Jan 17 11:24 nan_individualII5-pheval_gene_result.parquet.zstd
-rw-r--r-- 1 jules jules 4388133 Jan 10 16:26 nan_individualII5-pheval_gene_result.tsv

Write the results using polars dataframe -> (zstd) parquet

This is also super-easy to read during the benchmarking phase.
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@julesjacobsen