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FileNotFoundError in Pretraining Scripts for Structure Encoder and MUV Dataset #1

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hebatef opened this issue Jan 28, 2025 · 0 comments

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hebatef commented Jan 28, 2025

Steps to Reproduce:

Run the following command:

   python pretrain.py --from_yaml configs/cl_pretrain/pretrain_drugbank_basal.yaml

I encountered the following error:

   "models.py", line 224, in get_str_encoder
      state_dict = torch.load(pre_trained_path, map_location=torch.device('cpu'))
   .....
   FileNotFoundError: [Errno 2] No such file or directory: '.../pretraining/str/GIN_256x4_muv.pt'

Then, I attempted to run structure_pretraining_muv.py and encountered another error:

   FileNotFoundError: [Errno 2] No such file or directory: '.../muv_filtered_torchdrug_new.csv'

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