diff --git a/functional-annotation.wdl b/functional-annotation.wdl index 67fd734..2f191b0 100755 --- a/functional-annotation.wdl +++ b/functional-annotation.wdl @@ -228,7 +228,7 @@ task ko_ec { ${project_id}_ko.tsv ${project_id}_ec.tsv \ ${project_id}_gene_phylogeny.tsv ${project_id}_ko_ec.gff \ ${project_id}_proteins.img_nr.last.blasttab && \ - python /opt/omics/bin/functional_annotation/create_scaffold_lineage.py ${project_id}_gene_phylogeny.tsv ${project_id}_lineage_sdb.tsv + python /opt/omics/bin/functional_annotation/create_scaffold_lineage.py ${project_id}_gene_phylogeny.tsv ${project_id}_scaffold_lineage.tsv #get version information lastal_version="`${lastal} -V`" @@ -249,7 +249,7 @@ task ko_ec { File ec_tsv = "${project_id}_ec.tsv" File phylo_tsv = "${project_id}_gene_phylogeny.tsv" File gff = "${project_id}_ko_ec.gff" - File lineage_tsv = "${project_id}_lineage_sdb.tsv" + File lineage_tsv = "${project_id}_scaffold_lineage.tsv" String lastal_ver = read_string(lastal_version_file) String img_nr_db_ver = read_string(img_nr_db_version_file) }