Skip to content

Latest commit

 

History

History
24 lines (16 loc) · 994 Bytes

RELEASE_NOTES.md

File metadata and controls

24 lines (16 loc) · 994 Bytes

Release Notes

1.1.2 - 2019-02-20

  • Fix bug where using a VCF input that has no variant lines would output a blank VCF (instead of a VCF with just the header lines)

1.1.1 - 2019-02-12

  • When any pipe fails (bior_* commands piped together), fail the whole command instead of eating the error and exiting with exitcode 0
  • Fix name of command in the command help
  • Enlarge scan of header to include 20,000 lines instead of 2,000 (since some headers are bigger than that)
  • Reset the IFS variable after the running the commands so tabs and newlines don't get shredded
  • Check the exit code of the full bior_* command pipe and error on any problems
  • Account for VCFs that have no variant lines (instead of failing)

1.1.0 - 2018-07-25

  • Added cutSamples groovy code to remove samples columns from VCF before processing
  • Added merge groovy code to merge annotated VCF output files back into a single VCF
  • Small fixes to bior_annotate_lite

1.0.0 - 2018-05-10

  • Initial release