forked from hojsgaard/pbkrtest
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathChangeLog
201 lines (109 loc) · 4.8 KB
/
ChangeLog
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
2019-12-28 Søren Højsgaard <[email protected]>
* Making refit more verbose
2017-03-12 Søren Højsgaard <[email protected]>
* Converted to roxygen format
* Put on github
* Certain internal computations reverted to earlier implementation.
* Version 0.4-7 uploaded
2016-01-27 Søren Højsgaard <[email protected]>
* Update of description file with correct version requirement.
* Version 0.4-6 uploaded
2016-01-12 Søren Højsgaard <[email protected]>
* Tunings of vcovAdj in an attempt to gain speed in larger
problems.
* Illustrated in man page how to mimic vcov using parametric
bootstrap.
* Updates of man pages
* Version 0.4-5 uploaded
2015-12-11 Søren Højsgaard <[email protected]>
* Updates to comply with R-devel
* Version 0.4-4 uploaded
2015-07-12 Søren Højsgaard <[email protected]>
* Updated explanation about the samples that are not used in
PBmodcomp.
* Bug fixed in calculating denominator degrees of freedom (ddf)
for the F-test
* Version 0.4-3 uploaded
2014-11-11 Søren Højsgaard <[email protected]>
* Package no longer Depend(s) on MASS
* Version 0.4-2 uploaded
2014-09-08 Søren Højsgaard <[email protected]>
* vcovAdj was very slow on large problems. Thanks to John Fox for
notification. Reason was that chol and chol2inv was not imported
from the Matrix package. Fixed now.
* get_Lb_ddf function and method for linear mixed models added.
* Lb_ddf function added
* Version 0.4-1 uploaded
2014-08-11 Søren Højsgaard <[email protected]>
* Extended documentation of PBmodcomp
* model2restrictionMatrix and restrictionMatrix2model functions
have been added.
* CITATION file added; references updated to include JSS paper
* Version 0.4-0 uploaded
2013-11-19 Søren Højsgaard <[email protected]>
* get_ddf_Lb and ddf_Lb functions added. They provide adjusted
degrees of freedom for testing L'beta=0
* Version 0.3-8 uploaded
2013-09-26 Søren Højsgaard <[email protected]>
* Major reorganizing of KR-related code; preparing for the new
version of lme4 getting on CRAN
* Package no longer Depends on Matrix, but Imports instead
* Version 0.3-6 uploaded
2013-07-03 Søren Højsgaard <[email protected]>
* Plot method for parametric bootstrap tests improved
* Vignette improved
* Version 0.3-5 uploaded
2012-12-03 Ulrich Halekoh <[email protected]>
* .get_indices() corrected nn.groupFaclevels the number of the
levels for each random-term-factor
was erroneoulsy only returned once if a grouping factor
occurred several times as in
(1|Subject) + (0+Days|Subject)
* furthermore, the calculation of the number of
random-term-factors n.groupFac was rolled back, due to an
inconsistency in its definition via (getME(model,'n_rtrms') which
yieled for the above random term 2 (CRAN) and 1 (FORGE)
* compiled to Version 0.3-4
2012-11-20 Ulrich Halekoh <[email protected]>
* LMM_Sigma_G() added. Computes Sigma and the components of G
* vcovAdj() rewritten for correct extraction of the
submatrices of Zt for random effects for different grouping factors.
* getKR function for extracting slots from KRmodcomp object
* compiled to Version 0.3-3
2012-08-25 Søren Højsgaard <[email protected]>
* Now uses the parallel package instead of snow
* seed can be supplied to the random number generator
* Version 0.3-2 uploaded.
2012-04-24 Søren Højsgaard <[email protected]>
* Version 0.3-1 uploaded.
2012-02-26 Ulrich Halekoh <[email protected]>
* function vcovAdj() refits the large model if fitted with REML=FALSE and prints a warning
* function KRmodcomp() refits the large model if fitted with REML=FALSE and prints a warning
2012-02-26 Ulrich Halekoh <[email protected]>
* function for linear algebra .fatBL changed to .matrixNullSpace and improved
* function for linear algebra: .orthComplement simplified
* function for linear algebra added .colSpaceCompare
2011-02-17 Søren Højsgaard <[email protected]>
* Parametric bootstrap methods for lm/glm added
* Minor changes in KR-code to meet requests of John Fox
* Version 0.3.0 uploaded.
2011-01-17 Søren Højsgaard <[email protected]>
* F-distribution estimate of reference distribution for parametric
bootstrap corrected.
* Version 0.2.1 uploaded.
2011-12-30 Søren Højsgaard <[email protected]>
* F-distribution estimate of reference distribution for parametric
bootstrap added.
* Version 0.2.0 uploaded.
2011-12-08 Søren Højsgaard <[email protected]>
* Density estimate of reference distribution for parametric
bootstrap added.
* Version 0.1.3 uploaded.
2011-12-03 Søren Højsgaard <[email protected]>
* Important speedup of KRmodcomp
* Version 0.1.2 uploaded.
2011-11-11 Søren Højsgaard <[email protected]>
* Various changes
* Version 0.1.1 uploaded
2011-10-23 Søren Højsgaard <[email protected]>
* Version 0.1.0 uploaded