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requirements.txt
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requirements.txt
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# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
backports=1.0=py27_intel_6
backports_abc=0.5=py27_intel_0
bcftools=1.5=3
biopython=1.69=np112py27_0
bleach=1.5.0=py27_intel_0
bzip2=1.0.6=intel_13
cairo=1.14.8=intel_1
certifi=2016.2.28=py27_0
cmake=3.6.3=0
configparser=3.5.0=py27_intel_3
curl=7.54.1=0
cycler=0.10.0=py27_intel_5
dbus=1.10.20=0
decorator=4.0.11=py27_intel_1
entrypoints=0.2.2=py27_intel_2
enum34=1.1.6=py27_intel_5
expat=2.1.0=0
fontconfig=2.12.1=intel_0
freetype=2.5.5=intel_9
functools32=3.2.3.2=py27_intel_5
get_terminal_size=1.0.0=py27_intel_5
glib=2.50.2=1
gmp=6.1.0=0
gsl=2.2.1=0
gst-plugins-base=1.8.0=0
gstreamer=1.8.0=0
harfbuzz=0.9.39=2
html5lib=0.999=py27_intel_0
htslib=1.5=0
icc_rt=16.0.3=intel_14
icu=54.1=intel_3
intelpython=2018.0.0=3
ipykernel=4.6.1=py27_intel_0
ipython=5.3.0=py27_intel_0
ipython_genutils=0.2.0=py27_intel_0
jbig=2.1=0
jinja2=2.9.6=py27_intel_0
jpeg=9b=intel_0
jsonschema=2.6.0=py27_intel_0
jupyter_client=5.1.0=py27_intel_0
jupyter_core=4.3.0=py27_intel_1
krb5=1.13.2=0
libffi=3.2.1=intel_4
libgcc=5.2.0=0
libgfortran=3.0.0=1
libiconv=1.14=0
libpng=1.6.30=intel_0
libsodium=1.0.10=intel_6
libssh2=1.8.0=0
libtiff=4.0.8=intel_1
libxcb=1.12=1
libxml2=2.9.4=intel_10
mafft=7.245=0
markupsafe=0.23=py27_intel_6
matplotlib=2.0.0=py27_intel_0
mistune=0.7.4=py27_intel_1
mkl=2017.0.3=intel_6
nbconvert=5.2.1=py27_intel_0
nbformat=4.3.0=py27_intel_0
ncurses=5.9=10
notebook=5.4.1=py27_intel_0
numpy=1.12.1=py27_intel_8
openblas=0.2.19=0
openmp=2017.0.3=intel_8
openssl=1.0.2k=intel_3
pandas=0.20.1=np112py27_intel_1
pandoc=1.15.0.6=0
pandocfilters=1.4.1=py27_intel_0
pango=1.40.3=1
path.py=10.3.1=py27_intel_0
pathlib2=2.2.1=py27_intel_0
patsy=0.4.1=py27_0
pcre=8.39=1
pexpect=4.2.1=py27_intel_1
pickleshare=0.7.4=py27_intel_1
pip=9.0.1=py27_intel_0
pixman=0.34.0=intel_0
prompt_toolkit=1.0.14=py27_intel_0
psutil=5.2.2=py27_0
ptyprocess=0.5.1=py27_intel_5
pycairo=1.10.0=py27_intel_5
pygments=2.2.0=py27_intel_1
pyparsing=2.1.4=py27_intel_5
pyqt=5.6.0=py27_2
pysam=0.12.0.1=htslib1.5_0
python=2.7.13=intel_2
python-dateutil=2.6.0=py27_intel_3
pytz=2017.2=py27_intel_3
pyyaml=3.12=py27_0
pyzmq=16.0.2=py27_intel_3
qt=5.6.2=5
r-assertthat=0.2.0=r3.4.1_0
r-backports=1.1.0=r3.4.1_0
r-base=3.4.1=0
r-base64enc=0.1_3=r3.4.1_0
r-bh=1.62.0_1=r3.4.1_0
r-bindr=0.1=r3.4.1_0
r-bindrcpp=0.2=r3.4.1_0
r-bitops=1.0_6=r3.4.1_2
r-boot=1.3_19=r3.4.1_0
r-broom=0.4.2=r3.4.1_0
r-car=2.1_4=r3.4.1_0
r-caret=6.0_76=r3.4.1_0
r-catools=1.17.1=r3.4.1_2
r-cellranger=1.1.0=r3.4.1_0
r-class=7.3_14=r3.4.1_0
r-cluster=2.0.6=r3.4.1_0
r-codetools=0.2_15=r3.4.1_0
r-colorspace=1.3_2=r3.4.1_0
r-crayon=1.3.2=r3.4.1_0
r-curl=2.6=r3.4.1_0
r-data.table=1.10.4=r3.4.1_0
r-dbi=0.6_1=r3.4.1_0
r-dichromat=2.0_0=r3.4.1_2
r-digest=0.6.12=r3.4.1_0
r-dplyr=0.7.0=r3.4.1_0
r-essentials=1.6.0=r3.4.1_0
r-evaluate=0.10=r3.4.1_0
r-forcats=0.2.0=r3.4.1_0
r-foreach=1.4.3=r3.4.1_0
r-foreign=0.8_68=r3.4.1_0
r-formatr=1.5=r3.4.1_0
r-ggplot2=2.2.1=r3.4.1_0
r-gistr=0.4.0=r3.4.1_0
r-glmnet=2.0_10=r3.4.1_0
r-glue=1.1.1=r3.4.1_0
r-gtable=0.2.0=r3.4.1_0
r-haven=1.0.0=r3.4.1_0
r-hexbin=1.27.1=r3.4.1_0
r-highr=0.6=r3.4.1_0
r-hms=0.3=r3.4.1_0
r-htmltools=0.3.6=r3.4.1_0
r-htmlwidgets=0.8=r3.4.1_1
r-httpuv=1.3.3=r3.4.1_0
r-httr=1.2.1=r3.4.1_0
r-irdisplay=0.4.4=r3.4.1_0
r-irkernel=0.7.1=r3.4.1_0
r-iterators=1.0.8=r3.4.1_0
r-jsonlite=1.5=r3.4.1_0
r-kernsmooth=2.23_15=r3.4.1_0
r-knitr=1.16=r3.4.1_0
r-labeling=0.3=r3.4.1_2
r-lattice=0.20_35=r3.4.1_0
r-lazyeval=0.2.0=r3.4.1_0
r-lme4=1.1_13=r3.4.1_0
r-lubridate=1.6.0=r3.4.1_0
r-magrittr=1.5=r3.4.1_2
r-maps=3.2.0=r3.4.1_0
r-markdown=0.8=r3.4.1_0
r-mass=7.3_47=r3.4.1_0
r-matrix=1.2_10=r3.4.1_0
r-matrixmodels=0.4_1=r3.4.1_0
r-mgcv=1.8_17=r3.4.1_0
r-mime=0.5=r3.4.1_0
r-minqa=1.2.4=r3.4.1_2
r-mnormt=1.5_5=r3.4.1_0
r-modelmetrics=1.1.0=r3.4.1_0
r-modelr=0.1.0=r3.4.1_0
r-munsell=0.4.3=r3.4.1_0
r-nlme=3.1_131=r3.4.1_0
r-nloptr=1.0.4=r3.4.1_2
r-nnet=7.3_12=r3.4.1_0
r-openssl=0.9.6=r3.4.1_0
r-pbdzmq=0.2_6=r3.4.1_0
r-pbkrtest=0.4_7=r3.4.1_0
r-pkgconfig=2.0.1=r3.4.1_0
r-plogr=0.1_1=r3.4.1_0
r-plyr=1.8.4=r3.4.1_0
r-pryr=0.1.2=r3.4.1_0
r-psych=1.7.5=r3.4.1_0
r-purrr=0.2.2.2=r3.4.1_0
r-quantmod=0.4_9=r3.4.1_0
r-quantreg=5.33=r3.4.1_0
r-r6=2.2.1=r3.4.1_0
r-randomforest=4.6_12=r3.4.1_0
r-rbokeh=0.5.0=r3.4.1_0
r-rcolorbrewer=1.1_2=r3.4.1_3
r-rcpp=0.12.11=r3.4.1_0
r-rcppeigen=0.3.3.3.0=r3.4.1_0
r-readr=1.1.1=r3.4.1_0
r-readxl=1.0.0=r3.4.1_0
r-recommended=3.4.1=r3.4.1_0
r-rematch=1.0.1=r3.4.1_0
r-repr=0.10=r3.4.1_0
r-reshape2=1.4.2=r3.4.1_0
r-rlang=0.1.1=r3.4.1_0
r-rmarkdown=1.5=r3.4.1_0
r-rpart=4.1_11=r3.4.1_0
r-rprojroot=1.2=r3.4.1_0
r-rvest=0.3.2=r3.4.1_0
r-scales=0.4.1=r3.4.1_0
r-selectr=0.3_1=r3.4.1_0
r-shiny=1.0.3=r3.4.1_0
r-sourcetools=0.1.6=r3.4.1_0
r-sparsem=1.77=r3.4.1_0
r-spatial=7.3_11=r3.4.1_0
r-stringi=1.1.5=r3.4.1_0
r-stringr=1.2.0=r3.4.1_0
r-survival=2.41_3=r3.4.1_0
r-tibble=1.3.3=r3.4.1_0
r-tidyr=0.6.3=r3.4.1_0
r-tidyverse=1.1.1=r3.4.1_0
r-ttr=0.23_1=r3.4.1_0
r-uuid=0.1_2=r3.4.1_0
r-xml2=1.1.1=r3.4.1_0
r-xtable=1.8_2=r3.4.1_0
r-xts=0.9_7=r3.4.1_2
r-yaml=2.1.14=r3.4.1_0
r-zoo=1.8_0=r3.4.1_0
readline=6.2=2
samtools=1.5=1
scandir=1.5=py27_intel_0
scipy=0.19.0=np112py27_intel_2
scons=2.3.0=py27_0
seaborn=0.8=py27_0
setuptools=27.2.0=py27_intel_0
simplegeneric=0.8.1=py27_intel_5
singledispatch=3.4.0.3=py27_intel_5
sip=4.18=py27_0
six=1.10.0=py27_intel_8
sqlite=3.13.0=intel_15
ssl_match_hostname=3.5.0.1=py27_intel_5
statsmodels=0.8.0=np112py27_0
subprocess32=3.2.7=py27_0
tcl=8.6.4=intel_17
terminado=0.6=py27_intel_6
testpath=0.3.1=py27_intel_0
tk=8.6.4=intel_26
tornado=4.5.1=py27_intel_0
traitlets=4.3.2=py27_intel_1
wcwidth=0.1.7=py27_intel_5
wheel=0.29.0=py27_intel_5
xz=5.2.2=intel_16
yaml=0.1.6=0
zeromq=4.1.5=intel_0
zlib=1.2.11=intel_3