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 <span id="projectnumber">0.0.1</span>
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Namespaces</h2></td></tr>
<tr class="memitem:namespacerun__pipeline__lesionsizes"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html">run_pipeline_lesionsizes</a></td></tr>
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Variables</h2></td></tr>
<tr class="memitem:a275196213a52b483bde36a8d8b8535cb"><td class="memItemLeft" align="right" valign="top">tuple </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a275196213a52b483bde36a8d8b8535cb">run_pipeline_lesionsizes.parser</a></td></tr>
<tr class="separator:a275196213a52b483bde36a8d8b8535cb"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa88ad88d9cf23592a308b4d4e2ed6ebf"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#aa88ad88d9cf23592a308b4d4e2ed6ebf">run_pipeline_lesionsizes.help</a> = 'Size for the spiculated mass'</td></tr>
<tr class="separator:aa88ad88d9cf23592a308b4d4e2ed6ebf"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae091ae8eef37ab6c53b0409575d19343"><td class="memItemLeft" align="right" valign="top">tuple </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#ae091ae8eef37ab6c53b0409575d19343">run_pipeline_lesionsizes.lesion_size</a> = parser.parse_args()</td></tr>
<tr class="separator:ae091ae8eef37ab6c53b0409575d19343"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a459355f58091ae51752cbc1b81939a7d"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a459355f58091ae51752cbc1b81939a7d">run_pipeline_lesionsizes.hpc_cluster_ip</a> = "192.168.45.21"</td></tr>
<tr class="separator:a459355f58091ae51752cbc1b81939a7d"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a121e580b0ae55595847533bd0f4c9250"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a121e580b0ae55595847533bd0f4c9250">run_pipeline_lesionsizes.phantoms_folder</a> = "/gpfs_projects/VICTRE/pivotal/phantoms/withLesion/"</td></tr>
<tr class="separator:a121e580b0ae55595847533bd0f4c9250"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae2a3f1b39ec7dc28c3aa3bc223432ba8"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#ae2a3f1b39ec7dc28c3aa3bc223432ba8">run_pipeline_lesionsizes.density</a> = "dense"</td></tr>
<tr class="separator:ae2a3f1b39ec7dc28c3aa3bc223432ba8"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a23bb2caa24e95d5ce8622ae343b0035f"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a23bb2caa24e95d5ce8622ae343b0035f">run_pipeline_lesionsizes.num_cases</a> = 3</td></tr>
<tr class="separator:a23bb2caa24e95d5ce8622ae343b0035f"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a17e351f66c99883c1fc46e398ddb89db"><td class="memItemLeft" align="right" valign="top">tuple </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a17e351f66c99883c1fc46e398ddb89db">run_pipeline_lesionsizes.all_seeds</a> = np.loadtxt(phantoms_folder + density + "/seeds.txt")</td></tr>
<tr class="separator:a17e351f66c99883c1fc46e398ddb89db"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aba8698213c56a7ecc0806eb68c010d63"><td class="memItemLeft" align="right" valign="top">list </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#aba8698213c56a7ecc0806eb68c010d63">run_pipeline_lesionsizes.lesion_only_materials</a></td></tr>
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<tr class="memitem:aa2e480913d7171fd2b0c89520bcec773"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#aa2e480913d7171fd2b0c89520bcec773">run_pipeline_lesionsizes.spectrum_file</a> = "./Victre/projection/spectrum/W28kVp_Rh50um_Be1mm_Al2mm_MTF.spc"</td></tr>
<tr class="separator:aa2e480913d7171fd2b0c89520bcec773"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae359043ae5c4f2c1d8f12c0cdbffb932"><td class="memItemLeft" align="right" valign="top">list </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#ae359043ae5c4f2c1d8f12c0cdbffb932">run_pipeline_lesionsizes.seed</a> = all_seeds[n]</td></tr>
<tr class="separator:ae359043ae5c4f2c1d8f12c0cdbffb932"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa31734859d313f521c7643f1db6be86c"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#aa31734859d313f521c7643f1db6be86c">run_pipeline_lesionsizes.phantom_file</a> = phantoms_folder+density+\</td></tr>
<tr class="separator:aa31734859d313f521c7643f1db6be86c"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6036549ef880af11d13c9e0c5d2c001a"><td class="memItemLeft" align="right" valign="top">string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a6036549ef880af11d13c9e0c5d2c001a">run_pipeline_lesionsizes.lesion_file</a> = "lesions/spiculated/mass_-308854003_size{:.2f}.h5"</td></tr>
<tr class="separator:a6036549ef880af11d13c9e0c5d2c001a"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac13a2bd6cea7d4d8155376ddaf1ba751"><td class="memItemLeft" align="right" valign="top">tuple </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#ac13a2bd6cea7d4d8155376ddaf1ba751">run_pipeline_lesionsizes.pline</a></td></tr>
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<tr class="memitem:a3b75350f1aa1a1b47aa8ef34a06809db"><td class="memItemLeft" align="right" valign="top">dictionary </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a3b75350f1aa1a1b47aa8ef34a06809db">run_pipeline_lesionsizes.roi_sizes</a></td></tr>
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<tr class="memitem:a8e812d3e5e9a02e87801a5fcdd32c268"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="namespacerun__pipeline__lesionsizes.html#a8e812d3e5e9a02e87801a5fcdd32c268">run_pipeline_lesionsizes.n</a> = 4</td></tr>
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