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lines changed Original file line number Diff line number Diff line change @@ -309,7 +309,7 @@ ${DIR}/quants/salmon_orthomerged_${RUNOUT}/quant.sf:${DIR}/assemblies/${RUNOUT}.
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rm -f " ${RUNOUT} " .sorted.bam
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touch ${DIR} /reports/${RUNOUT} .strandeval.done
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printf " \n\n***** See the following link for interpretation ***** \n"
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- printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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+ printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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clean :
Original file line number Diff line number Diff line change @@ -111,7 +111,7 @@ clean:
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rm -f " ${RUNOUT} " .sorted.bam
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touch ${DIR} /reports/${RUNOUT} .strandeval.done
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printf " \n\n***** See the following link for interpretation ***** \n"
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- printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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+ printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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reportgen :
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printf " \n\n***** QUALITY REPORT FOR: ${RUNOUT} ****"
Original file line number Diff line number Diff line change @@ -77,4 +77,4 @@ welcome:
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rm -f " ${RUNOUT} " .sorted.bam
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touch ${DIR} /reports/${RUNOUT} .strandeval.done
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printf " \n\n***** See the following link for interpretation ***** \n"
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- printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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+ printf " ***** https://oyster-river-protocol.readthedocs.io/en/latest/strandexamine.html ***** \n\n"
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