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api.html
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---
layout: idr
title: API
---
<!-- begin marketing header -->
<div class="logo"><a href="index.html"><img src="{{ "/img/logos/logo-idr.svg" | prepend: site.baseurl }}?{{ site.time | date: '%s%N' }}" alt="IDR logo"/></a></div>
<header class="marketing-hero">
<div class="row homepage text-center">
<div class="medium-12 columns">
<h1 class="hero-main-header">IDR API</h1>
<p class="hero-subheader small-10 medium-10 large-10 small-offset-1 medium-offset-1 large-offset-1">
The Image Data Resource (IDR) provides a JSON-based API for accessing all datasets,
thumbnails and metadata. This API is a combination of the standard
<a href="https://www.openmicroscopy.org/site/support/omero/developers/Web.html">OMERO.web API</a>
and newly developed plugins like <a href="https://github.com/ome/omero-mapr/tree/master/docs">OMERO.mapr</a>.
</p>
</div>
</div>
</header>
<!-- begin Example section -->
<hr class="whitespace">
<div class="row">
<div class="small-10 small-centered medium-10 medium-centered columns">
<div class="row horizontal">
<div>
<p>The code for the IPython notebook below is available on GitHub
at <a href="https://github.com/IDR/idr-notebooks/tree/master/notebooks">
https://github.com/IDR/idr-notebooks/blob/master/notebooks/IDR_API_example_script.ipynb</a>
as well as on the IDR <a href="/jupyter">virtual analysis environment</a>.
</p>
<hr>
{% capture my-include %}{% include IDR_API_example_script.md %}{% endcapture %}
{{ my-include | markdownify }}
</div>
</div>
</div>
</div>
<hr class="whitespace">
<!-- end Images section -->