CHANGELOG.md

DesignSafe-CI Portal Release Notes

v2.7.0 (20180804)

Improvements:

• Send email to users added to a project using Celery.

v2.7.0-20180803

Fixes:

• Publication citations.
• Publication tree modal.
• Hybrid Sim drop down select labels.

v2.7.0-20180802

Improvements:

• Correctly indexing mimetypes on Elasticsearch.

Fixes:

• Hybrid Simulation Published view.

v2.7.0-20180801

Improvements:

• Hybrid Simulation updates.
• "Open in Jupyter" for notebooks.
• Add link to retrieve forgotten username.

Fixes:

• PI is required to create a project.
• Fixed pagination on My Data.

v2.7.0-20180703

Improvements:

• Hybrid Sim metadata check

Fixes:

• Hybrid Sim

v2.7.0-20180702

Fixes:

• Hybrid Sim
• Citations
• Breadcrumbs

v2.7.0-20180701

Improvements:

• Citation Preview in Publish Area....
• Video banner for preview modals.

Fixes:

• Breadcrumbs fix within project search.
• Hybrid Outputs models.

v2.7.0-20180701

Improvements:

• Project indexing.
• Add app icons to application tray.
• SCEC jupyter notebook creates a specific folder and file before launching.
• Search in My Projects.
• Hybrid Simulation publication pipeline.

Fixes:

• Associated projects.
• Nees projects not loading.
• Remove integrate analysis and report.
• Show spinner in My Projects on search/navigation.
• Ensue project data is retrieved before doing anything else.

v20180601

Fixes:

• Loading spinners across data browsers.
• Publications breadcrumbs.
• My Projects pagination.

Improvements:

• Refresh files listing in Workspace.
• Hybrid Simulation data model.
• Execution Systems Monitor.
• EZID download link on publications.
• Search in My Projects.
• ProcessorsPerNode option in app.

v2.6.10

Fixes:

• Showing correct year on citation.

v2.6.9 (20180508)

Fixes:

• Hot-fix for marker placement

v2.6.8 (20180507)

Improvements:

• Publication file listing fallback
• Search string supports AND and OR

Fixes:

• Public search
• External resources error message
• User agent string check
• Hash symbol escaped correctly from files urls

v2.6.7

Fixes:

• Files from "Other" projects are not being copied correctly when publishing

20180506

Improvements:

• Launch jupyter notebooks from App Tray
• Altmetrics metadata in publications

Fixes:

• Public search fix
• Datadepot left navbar highlight

v2.6.6

Fixes:

• Project's ACLs when adding members
• User creation error on table field

v2.6.5

Fixes:

• Analysis and Reports are not required on simulation project anymore
• Citation button working on simulations
• Associated projects rendered correctly on publications

v2.6.4 (20180505)

Fixes:

• Fix typo on copying files to corral

v2.6.3 (20180504)

Fixes:

• Related file paths for Sim Pubs

v2.6.2 (20180503)

Fixes:

• Breadcrumbs
• Partner Data Apps on workspace

v2.6.1 (20180502)

Improvements:

• App categories
• Usage of Partner Data Apps

Fixes:

• Simulation publication rendering issues
• Simulation project client validation
• Site map bug

v2.6.0 (20180501)

Improvements:

• Ticket form update
• Job status notifications
• File search within Data Depot
• Removal of search on external resources
• Publication form validation
• HTML application can be disabled now
• Publish apps can be now marked as not published for edit needs
• Check user agent and show a ribbon if not 100% supported
• Data Depot button labels and messages

Fixes:

• Preview for files that are not marked as files
• Navbar dropdown spacing
• Stampede app warning text
• App Category in app definition's tags
• Get App Category from metadata
• App cloning form
• Data Depot ribbon floating

v2.5.1 (20180413)

Fixes:

• Typo moving files to published

20180412

Fixes:

• Typo when checking for filepaths to publish

20180411

Fixes:

• Making sure published files are copied for "Other" project

2.5.0 (20180410)

Improvements:

• Admin ability to re-publish project

20180409

Fixes:

• Search UI updates

2.4.8 (20180408)

Fixes:

• Authorship for Team Members

20180407

Improvements:

• Improve workspace category handling

Fixes:

• Community search
• User home creation

20180406

Fixes:

• Root directory was not being indeed when sharing files

20180405

Fixes:

• Ignoring 404 when deleting documents from elasticsearch

20180404

Fixes:

• Shared with Me is working again

20180403

Fixes:

• Nees listing was not working correctly

2.4.7 (20180402)

Fixes:

• Moving to Recaptcha 2

2.4.6 (20180401)

Fixes:

• Listing NEES data directly from the filesystem

2.4.5

Fixes:

• Permission indexing

2.4.4

Fixes:

• NEES elasticsearch query

2.4.3

Fixes:

• Removing _links from indexed permissions

2.4.2

Fixes:

• Settings project ID after creation

2.4.1

Fixes:

• Using correct NESS index

2.4.0

Improvements:

• Disable Stampede 1 apps
• Add aspect ratio on CMS for podcasts

Fixes:

• Update local dev certificates
• Add CA root certificate
• Fix Elasticsearch migration
• Simulation metadata preview

20180304

Fixes:

• Correct model lookup for entities

20180303

Improvements:

• Video notifications

Fixes:

• Workspace categories
• Project create validation
• Django command to remove null pointer references on metadata association Ids
• Authorship on simulations
• Merging parallel metadata calls into one
• Simulation entitites class and API correctness

20180302

Fixes:

• Collaborator modal works better
• Google secrets managed in settings.py

20180301

Improvements:

• Add community data to Hazmapper
• Updating ticket submission form

Fixes:

• Add action link to VNC notification
• Avoid multiple job submission
• Simulation Preview Tree

20180205

Improvements:

• Search improvements - better ES queries.
• Static files handling improvements - no django-pipeline, adding SASS to webpack.

Fixes:

• Google Drive Token expiration error.
• Update nodeCount to dropdown.

20180204

Fixes:

• Listing analysis/rerpot correct files listing

20180203

Fixes:

• Simulation Model CSS color coding
• Preview Videos Chrome bug

20180202

Improvements:

• Adding first version of Simulation Data Model

Fixes:

• Performance on workspace loading.
• Data depot selection of files.
• Video previewer not working on Chrome.

20180201

Improvements:

• Updating Nginx config to point to new local cert name.
• Creating new cert for local dev.
• Adding configuration to create local dev cert in the future.
• Enabling video preview embedded in browser
• Adding My Projects to Workspace file browser

Fixes:

• Displaying correct project name on breadcrumbs

v2.3.2

Fixes:

• Typo when appending team members
• Add files for addition

20180105

Improvements:

• Updating MATLAB Software License Language
• Adding subsites to Sitemaps
• Re-enabling Data Depot search bar with improvements.
• Disabling extra step on login workflow
• Adding LS-DYNA to app list and corresponding license.

Fixes:

• Remove 'maxRunTime' and 'archivePath' on job form for simplicity.
• Adding 'My Projects' to Worksapce mini browser.
• Calculating 'processesPerNode' for jobs without 'nodeCount'.
• Rejecting pending promises on data depot for files listing.
• Temporarily removing projet image and non-supported project types.

20180104

Improvements:

• Adding profiling decorator to use on any view (Class or Function). Uses cProfiler and writes a profile and human readable stats to designsafe/stats.

20180103

Improvements:

• Configuring Webhooks correctly to work with Potree

20180102

Fixes:

• Fixed error when adding team members
• Fixed error when adding files for publishing

v2.3.1

Fixes:

• Correct defaults on node and processes for job sumission

v2.3.0

Fixes:

• Correct next parameted after login
• Retry failed uploads
• Publication pipeline bugs

Improvements:

• setfacl on files in data depot
• Image viewer
• Workspace apps categorization
• Sitemap
• Search

v2.2.1

Fixes:

• Elasticsearch connection config

v2.2.0

Fixes:

• DOI builder bugs
• Adding team members in projects
• Curation pipeline bugs

Improvements:

• Elasticsearch connection timeout and retry
• Moving models files

v2.1.0

Fixes:

• PDF previewer
• Experimental Project view
• Data Depot listings

Improvements:

• Hazmapper images
• Notifications UI
• RAPID UI
• Adding Google Drive to Data Depot
• HPC apps node count and max run time
• Elasticsearch connection

v2.0.5

Fixes:

• Shared with me bug

v2.0.4

Fixes:

• Showing correct entity on tree view when multiple siblings

v2.0.3

Fixes:

• Missing div in analysis list

v2.0.2

Fixes:

• Sorting authors in project and experiments

v2.0.1

Fixes:

• Publication metadata rendering

v2.0.0

Updates:

• Django == 1.10
• Django-cms == 3.3
• Elasticsearch == 5.x
• Celery == 4.x

Improvements:

• First version of API REST end point to manage projects
• HazMapper metrics
• Rapid admin interface
• QGIS
• "Other" selections for experiments
• "Other" data model for projects
• Re-organizing config files and docker-compose files

Fixes:

• Folder download button disabled
• Using correct EZID shoulder
• Re-organizing projects view
• Re-organizing published view
• Updating Elasticsearch filtered queries
• Fix various task errors
• Rapid admin links

v1.1.1

Improvements:

• Using more processes for uWSGI

Fixes:

• Registration form bugs
• Rapid links

v1.1.0

Features:

• Rapid Admin interface

Improvements:

• Deleting stale code
• Change configuration of uWSGI to add more processes
• Adding New Relic monitoring
• Improving Agave client creation

Fixes:

• Project metadata serialization

v1.0.2

Fixes:

• Category tags in files were breaking serialization of categories and entities.

v1.0.1

Fixes:

• Using ReCaptcha for forms.
• Elasticsearch queries configuration work better for site-wide search.
• Breadcrumb links in published data.
• Report file listing for a public project.
• Better serialization for entities.
• Correctly showing newly published projects in listings.
• Using os library to copy published files in corral.
• Using customized names when publishing project.
• Celery Tasks retry fixes.

v1.0.0

Note:

This is a transition version. From now on versions will correctly be in semver format < mayor >.< minor >.< bug fix >

v0.9.28

Improvements:

• Dashboard layout.
• Publication Messages.

v0.9.27

Fixes:

• Published files preview.
• CHANGELOG

v0.9.26

Improvements:

• HAZMAP Reconnaisance.
• Data Curiation for Projects.
• Publication pipeline.
• Projects mounting on notebooks.

Fixes:

• Dropbox path encoding.
• Site Menu improvements.
• Site Search improvements.
• External Resource enabling bug.
• Project human readable ID.
• Setting permissions on home directories.
• Site Header improvements.

v0.9.25

Improvements:

• Community Data available.

Fixes:

• Sitewide Search IE11 fix.
• Public data is viewable by Anonymous user.

v0.9.24

Fixes:

• All forms can be submitted.
• Project creation without a PI.

v0.9.23

Improvements:

• Site-wide search.
• Image previewer.
• Dropbox capabilities.

Fixes:

• Configuring celery to make sure tasks do not run very long.
• Upating public data index mappings (elasticsearch).

v0.9.22

Fixes:

• Workspace Jupyter app is showing correct Launch button.
• Pagination is not skiping files.
• Loading .. legend in data depot.
• Karma config for correct test running.
• Creating come directory only if the user was created TODAY.
• Using retry() for job_watch and user home directory creation.

v0.9.21

Fixes:

• Link to project in email notification.
• Workspace drag and drop functionality.
• Public data metadata rendering.
• Public data breadcrumb links.
• Pagination in projects files listing.

v0.9.20

Features:

• Python Notebook preview

Improvements:

• Notifications architecture.
• Email notifications when user is added to a project.

Fixes:

• Remove NEEShub Account Access from Register and Login pages.
• Copy/move to Box.com disappeared as an option.

v0.9.19

Fixes:

• Uploading folders to 'My Data'.
• Allow creation of projects with long titles.
• Correctly redirecting to new Data Depot view from job 'output' button.

v0.9.18

Features:

• Professional profile in account profile.

Improvements:

• File toolbar is more visible.
• File toolbar icons show legends for easier use.
• Move to trash functionality in Projects.
• Search capability on every data depot section.

Fixes:

• Data Depot UI.
• Notification toasters showing up correctly.
• Information button correctly wired.

v0.9.17

Enhancements:

• Data Depot - New Version
  • Improved UI.
  • Improved search.
  • Improved file transfers.
  • Projects collaboration space.

Fixes:

• Improving system monitors
• Added terms and conditions link to profile page.
• Changes to header and footer.

v0.9.16

• Add RAPID facility site config.

v0.9.15

Fixes:

• Fixed ISE when token refresh fails and user is logged out; this triggers a logout message but MessagesMiddleware wasn't available yet.

v0.9.14

Fixes:

• Fixed bug in old public data browser

v0.9.13

Enhancements:

• Improved shared files display; no longer need to click though multiple directory levels to access shared content

Fixes:

• Fixed bug with text preview and non-unicode content encoding
• Fixed bug with connecting to VNC sessions from Job Status modal
• Fixed CSRF errors when accessing Public Data as Anonymous
• Fixed permissions on accessing mailing list subscribers
• Fixed unicode encoding bugs on mailing list subscribers
• Fixed Application display to show label instead of app ID

Other:

• Improved server logs

v0.9.12

Enhancements:

• Enhanced rendering of public data metadata
• Added opt-out feature for DesignSafe announce
• Added monitors for app execution systems

v0.9.11

Enhancements:

• Public data is back! We've fixed and improved the public data search
• Search URLs in the Data Browser are now shareable
• Added a link to submit a ticket if an error page is encountered. The ticket will automatically include the URL of the page that triggered the error as well as the referrer URL.

Fixes:

• Apps properly display name and version in the workspace instead of the internal app identifier.
• Corrected the state of some operations in the data browser that should not have been available for Public data or Box data.

v0.9.10

Fixes:

• Fixed issue with notifications for interactive jobs
• Fixed issue recording metadata for interactive jobs
• Disabled source selection on move dialog, since it is not supported
• Improved notification messages in Data Browser

v0.9.9

Enhancements:

• Improved notifications for files sharing, jobs; #10093
• Improved handling of token negotiation and refresh with Agave; #10111
• Improved application catalog (tray); #10391
• Added message when file preview is not available; #10475
• Various interface improvements

Bug fixes:

• Improved indexing and permissions validation on shared files and folders
• Fixed multiple issues surrounding file path encoding; #10266
• Fixed links to job outputs from workspace; #10124
• Fixed drag and drop effects; #10397
• Fixed notification for box transfers; #10275

v0.9.8

Bug fixes:

• Apply workaround to issue creating user home directories, #10447

v0.9.7

Bug fixes:

• Fix bug in public data Elasticsearch query

v0.9.6

Bug fixes:

• Fixed issue with copying files from DesignSafe to Box
• Fixed issue folder uploads not indexing properly

Improvements:

• Added infinite scroll to data browser for directories with lots of files. The data browser will load additional contents when scrolled to the bottom of the listing.
• Added metadata interface to new data browser
• Added "registration successful" page redirect to better inform new users of account activation steps.
• When sharing files, only apply changes to permissions, instead of reapplying all permissions.

v0.9.5

June 5, 2016

Improvements:

• Brand new Data Browser with several new features:
  • Box Integration
  • Streamlined interface
  • Improved drag-and-drop
  • Multiple file download
  • Expanded preview file type support
  • Folder upload (Chrome browser only)
  • Notifications
  • Single URL space for files/sharing
  • And More!

v0.9.4

April 21, 2016

Bug fixes:

• Fixed timeout/error when sharing large collections of files
• Fixed problems related to deleting files
• Fixed issue where sharing permissions displayed incorrect values
• Fixed errors when uploading a large number of files at once

Improvements:

• Significant improvements to indexing of files/permissions
• Added a Trash folder; file deletion is now two-step: Move to trash, then permenant delete
• Added ability to copy/move to the root folder in My Data; previously you could only move to a subfolder

v0.9.3

March 21, 2016

Bug fixes:

• Fixed a bug when two files/folders exists with the same name but different case
• Fixed a bug when sharing files/folders with spaces in the path
• Fixed a bug where download/preview was failing due to the files URL being double-encoded
• Fixed an issue where the portal would show as "logged out" when editing profile

Improvements:

• Added a fallback to Agave Files List when a path is loaded in the data browser but it has not been indexed yet.

v0.9.2

March 9, 2016

Bug fixes:

• Fixed a bug when moving/renaming files

Improvements:

• Multi-file uploads are done in parallel
• Data depot browser "Actions" menu updated
• Added "Connect" links in Job Status and Notification for VNC-type jobs such as MATLAB
• Updated text/working/typos throughout site

v0.9.0

March 7, 2016

First public release of the DesignSafe-CI Portal

v0.9.0-alpha-1

February 15, 2016

First alpha release of the Portal.

Features:

• Research Workbench
  • Discovery Workspace
    • ...
  • Data Depot Browser
    • ...
• Updated site navigation to support per-section navigation
  • Driven by CMS

v0.4.2

February 12, 2016

• Support per-site CMS permissions

v0.4.1

January 06, 2016

• Add individual EF sites.

v0.3.0

December 04, 2015

• Add CMS plugin for responsive embed

v0.2.0

November 24, 2015

• Added EF site subdomains

v0.1.1

• Fixed style bugs in forms template
• Added styled error templates

v0.1.0

October 1, 2015

• Initial release