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--------------------------------------------------------------------------- FieldError Traceback (most recent call last) Cell In[20], line 5 1 old_gene_symbols = ["MALAT1"] 2 new_gene_symbols = ["TSPAN6"] ----> 5 old_fs = ln.FeatureSet.filter(gene__name__in=old_gene_symbols).all() 7 new_gene = bt.Gene.filter(symbol__in=new_gene_symbols).all() 8 for fs in old_fs: File ~/code/lamindb/lamindb/_record.py:332, in filter(cls, *queries, **expressions) 329 if "_using_key" in expressions: 330 _using_key = expressions.pop("_using_key") --> 332 return QuerySet(model=cls, using=_using_key).filter(*queries, **expressions) File ~/code/lamindb/lamindb/_query_set.py:612, in QuerySet.filter(self, *queries, **expressions) 610 expressions = process_expressions(self, expressions) 611 if len(expressions) > 0: --> 612 return super().filter(*queries, **expressions) 613 else: 614 return self File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/query.py:1476, in QuerySet.filter(self, *args, **kwargs) 1471 """ 1472 Return a new QuerySet instance with the args ANDed to the existing 1473 set. 1474 """ 1475 self._not_support_combined_queries("filter") -> 1476 return self._filter_or_exclude(False, args, kwargs) File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/query.py:1494, in QuerySet._filter_or_exclude(self, negate, args, kwargs) 1492 clone._deferred_filter = negate, args, kwargs 1493 else: -> 1494 clone._filter_or_exclude_inplace(negate, args, kwargs) 1495 return clone File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/query.py:1501, in QuerySet._filter_or_exclude_inplace(self, negate, args, kwargs) 1499 self._query.add_q(~Q(*args, **kwargs)) 1500 else: -> 1501 self._query.add_q(Q(*args, **kwargs)) File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/sql/query.py:1609, in Query.add_q(self, q_object) 1600 # For join promotion this case is doing an AND for the added q_object 1601 # and existing conditions. So, any existing inner join forces the join 1602 # type to remain inner. Existing outer joins can however be demoted. 1603 # (Consider case where rel_a is LOUTER and rel_a__col=1 is added - if 1604 # rel_a doesn't produce any rows, then the whole condition must fail. 1605 # So, demotion is OK. 1606 existing_inner = { 1607 a for a in self.alias_map if self.alias_map[a].join_type == INNER 1608 } -> 1609 clause, _ = self._add_q(q_object, self.used_aliases) 1610 if clause: 1611 self.where.add(clause, AND) File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/sql/query.py:1641, in Query._add_q(self, q_object, used_aliases, branch_negated, current_negated, allow_joins, split_subq, check_filterable, summarize, update_join_types) 1637 joinpromoter = JoinPromoter( 1638 q_object.connector, len(q_object.children), current_negated 1639 ) 1640 for child in q_object.children: -> 1641 child_clause, needed_inner = self.build_filter( 1642 child, 1643 can_reuse=used_aliases, 1644 branch_negated=branch_negated, 1645 current_negated=current_negated, 1646 allow_joins=allow_joins, 1647 split_subq=split_subq, 1648 check_filterable=check_filterable, 1649 summarize=summarize, 1650 update_join_types=update_join_types, 1651 ) 1652 joinpromoter.add_votes(needed_inner) 1653 if child_clause: File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/sql/query.py:1491, in Query.build_filter(self, filter_expr, branch_negated, current_negated, can_reuse, allow_joins, split_subq, check_filterable, summarize, update_join_types) 1489 if not arg: 1490 raise FieldError("Cannot parse keyword query %r" % arg) -> 1491 lookups, parts, reffed_expression = self.solve_lookup_type(arg, summarize) 1493 if check_filterable: 1494 self.check_filterable(reffed_expression) File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/sql/query.py:1303, in Query.solve_lookup_type(self, lookup, summarize) 1301 expression = Ref(annotation, expression) 1302 return expression_lookups, (), expression -> 1303 _, field, _, lookup_parts = self.names_to_path(lookup_splitted, self.get_meta()) 1304 field_parts = lookup_splitted[0 : len(lookup_splitted) - len(lookup_parts)] 1305 if len(lookup_parts) > 1 and not field_parts: File ~/miniforge3/envs/lamindb/lib/python3.12/site-packages/django/db/models/sql/query.py:1768, in Query.names_to_path(self, names, opts, allow_many, fail_on_missing) 1760 if pos == -1 or fail_on_missing: 1761 available = sorted( 1762 [ 1763 *get_field_names_from_opts(opts), (...) 1766 ] 1767 ) -> 1768 raise FieldError( 1769 "Cannot resolve keyword '%s' into field. " 1770 "Choices are: %s" % (name, ", ".join(available)) 1771 ) 1772 break 1773 # Check if we need any joins for concrete inheritance cases (the 1774 # field lives in parent, but we are currently in one of its 1775 # children) FieldError: Cannot resolve keyword 'gene' into field. Choices are: _artifacts_m2m, _aux, _branch_code, _curation, _links_artifact, _tidytables, artifacts, cell_markers, components, composite, composite_id, created_at, created_by, created_by_id, description, dtype, features, genes, hash, id, is_type, itype, links_cellmarker, links_feature, links_gene, links_pathway, links_project, links_protein, maximal_set, minimal_set, n, name, ordered_set, otype, params, pathways, projects, proteins, records, run, run_id, slot, space, space_id, type, type_id, uid, validated_by, validated_by_id, validated_schemas
And maybe we should even hide most of the traceback while we're at it.
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Zethson
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And maybe we should even hide most of the traceback while we're at it.
The text was updated successfully, but these errors were encountered: