Issue in installing the software

[Maryamtarazkar]

Dear All,
I am trying to install the software on my system (ubuntu) and when I execute the script for installing the software (install_on_local.sh) I get following error;
"""
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

Package _openmp_mutex conflicts for:
hhsuite==3.3.0 -> _openmp_mutex[version='>=4.5']
python=3.7 -> libgcc-ng[version='>=7.5.0'] -> _openmp_mutex[version='>=4.5']
kalign2 -> libgcc-ng[version='>=9.3.0'] -> _openmp_mutex[version='>=4.5']
hmmer -> libgcc-ng[version='>=9.3.0'] -> _openmp_mutex[version='>=4.5']

Package libstdcxx-ng conflicts for:
python=3.7 -> libstdcxx-ng[version='>=7.2.0|>=7.3.0']
hmmer -> libstdcxx-ng[version='>=4.9|>=7.3.0|>=7.5.0|>=9.3.0']
hhsuite==3.3.0 -> libstdcxx-ng[version='>=7.5.0|>=9.3.0']
hhsuite==3.3.0 -> python[version='>=3.9,<3.10.0a0'] -> libstdcxx-ng[version='>=7.2.0|>=7.3.0']

Package libgcc-ng conflicts for:
hhsuite==3.3.0 -> perl[version='>=5.26.2,<5.26.3.0a0'] -> libgcc-ng[version='>=7.2.0|>=7.3.0']
hhsuite==3.3.0 -> libgcc-ng[version='>=7.5.0|>=9.3.0']The following specifications were found to be incompatible with your system:

• feature:/linux-64::__glibc==2.31=0
• hhsuite==3.3.0 -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17']
• hmmer -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17']
• kalign2 -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17']
• python=3.7 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']

Your installed version is: 2.31

Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: -
Found conflicts! Looking for incompatible packages.
"""
I mostly appreciate to suggest me what the issue comes from and how I can solve it?
Thanks so much
Maryam

[Nb3010]

The issue is related to the hhsuite package, apparently there is a channel missing (see below). I solved it by splitting up the command like:

conda install -y -c bioconda hmmer
conda install -y -c conda-forge -c hhsuite==3.3.0
conda install -y -c bioconda kalign2

at least I could install it step by step that way. Hope that helps!