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How to use fromexpression() of upsetR in complex upset? #176

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HelloWorldLTY opened this issue Mar 19, 2023 · 1 comment
Open

How to use fromexpression() of upsetR in complex upset? #176

HelloWorldLTY opened this issue Mar 19, 2023 · 1 comment
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enhancement New feature or request

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@HelloWorldLTY
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Hi, I think I did not find the place for formexpression()

If I intend to run command like:
upset(fromExpression(expressionInput), nsets=10, nintersects = 60, order.by = 'freq')
What should I do? Thanks a lot.

@HelloWorldLTY HelloWorldLTY added the enhancement New feature or request label Mar 19, 2023
@HelloWorldLTY
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I update my question, and I use from expression to plot the complexupsetR plot, but the set size is incorrect, every if I change the filter_intersection as True.

image

The result still does not reflect the true set size. I still use the from expression code.

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