From c04ba2eb1d2c0fdeea71c87f8933011abd88403d Mon Sep 17 00:00:00 2001
From: Dhananjhay <dhananjhay03@gmail.com>
Date: Thu, 16 Jan 2025 19:30:20 -0500
Subject: [PATCH] resolve dependencies in isolated conda envs

---
 hippunfold/workflow/envs/env1.yaml  | 1 +
 hippunfold/workflow/envs/env10.yaml | 2 +-
 hippunfold/workflow/rules/warps.smk | 4 ++--
 3 files changed, 4 insertions(+), 3 deletions(-)

diff --git a/hippunfold/workflow/envs/env1.yaml b/hippunfold/workflow/envs/env1.yaml
index c0ad7f87..29e64202 100644
--- a/hippunfold/workflow/envs/env1.yaml
+++ b/hippunfold/workflow/envs/env1.yaml
@@ -9,3 +9,4 @@ dependencies:
   - nibabel>=3.2.1
   - scikit-fmm>=2022.03.26
   - scipy=1.7.1
+  - pandas>=1.2.0,<1.3.0
diff --git a/hippunfold/workflow/envs/env10.yaml b/hippunfold/workflow/envs/env10.yaml
index febdf68e..9243b572 100644
--- a/hippunfold/workflow/envs/env10.yaml
+++ b/hippunfold/workflow/envs/env10.yaml
@@ -8,4 +8,4 @@ dependencies:
   - nibabel>=3.2.1
   - numpy
   - scipy=1.7.1
-  - astropy>=4.0,<4.3.1
+  - astropy
diff --git a/hippunfold/workflow/rules/warps.smk b/hippunfold/workflow/rules/warps.smk
index 2f815377..e269664e 100644
--- a/hippunfold/workflow/rules/warps.smk
+++ b/hippunfold/workflow/rules/warps.smk
@@ -441,7 +441,7 @@ rule create_warps_hipp:
     container:
         config["singularity"]["autotop"]
     conda:
-        "../envs/env1.yaml"
+        "../envs/env10.yaml"
     script:
         "../scripts/create_warps.py"
 
@@ -568,7 +568,7 @@ rule create_warps_dentate:
     container:
         config["singularity"]["autotop"]
     conda:
-        "../envs/env1.yaml"
+        "../envs/env10.yaml"
     script:
         "../scripts/create_warps.py"