@@ -24,7 +24,7 @@ Here are some examples of how to use the `plot_hipp_surf` function to visualize
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### Example 1: Plot Both Hemispheres
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``` python
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- from plotting import plot_hipp_surf
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+ from hippunfold_plot. plotting import plot_hipp_surf
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from hippunfold_plot.utils import get_resource_path
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# get subfields for demonstrating plotting
@@ -33,17 +33,18 @@ density = '1mm'
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# Plot dorsal view
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fig = plot_hipp_surf(label_gii.format(density = density), hemi = None , density = density, view = ' dorsal' )
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- fig.show()
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# Plot ventral view
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fig = plot_hipp_surf(label_gii.format(density = density), hemi = None , density = density, view = ' ventral' )
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- fig.show()
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- ```
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+ ```
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+ ![ png] ( example1_0.png )
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+ ![ png] ( example1_1.png )
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+
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### Example 2: Plot Left and Right Hemispheres Separately
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``` python
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- from plotting import plot_hipp_surf
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+ from hippunfold_plot. plotting import plot_hipp_surf
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from hippunfold_plot.utils import get_resource_path
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# get subfields for demonstrating plotting
@@ -52,31 +53,34 @@ density = '1mm'
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# Plot left hemisphere
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fig = plot_hipp_surf(label_gii.format(density = density), hemi = ' left' , density = density, view = ' dorsal' )
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- fig.show()
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# Plot right hemisphere
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fig = plot_hipp_surf(label_gii.format(density = density), hemi = ' right' , density = density, view = ' dorsal' )
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- fig.show()
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+
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```
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+
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+ ![ png] ( example2_0.png )
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+ ![ png] ( example2_1.png )
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- ### Example 3: Plot Unfolded Space
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+ ### Example 3: Plot unfolded and canonical space separately
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``` python
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- from plotting import plot_hipp_surf
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+ from hippunfold_plot. plotting import plot_hipp_surf
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from hippunfold_plot.utils import get_resource_path
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# get subfields for demonstrating plotting
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label_gii = get_resource_path(' tpl-avg_label-hippdentate_density-{density} _subfields.label.gii' )
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density = ' 1mm'
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# Plot left hemisphere in unfolded space
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- fig = plot_hipp_surf(label_gii.format(density = density), space = ' unfold' , hemi = ' left' , density = density, view = ' dorsal' )
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- fig.show()
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+ fig = plot_hipp_surf(label_gii.format(density = density), space = ' unfold' , density = density, view = ' dorsal' )
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- # Plot right hemisphere in unfolded space
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- fig = plot_hipp_surf(label_gii.format(density = density), space = ' unfold' , hemi = ' right' , density = density, view = ' dorsal' )
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- fig.show()
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+ # Plot left hemisphere in canonical space
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+ fig = plot_hipp_surf(label_gii.format(density = density), space = ' canonical' , density = density, view = ' dorsal' )
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```
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+
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+ ![ png] ( example3_0.png )
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+ ![ png] ( example3_1.png )
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## 🛠️ Functions
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@@ -128,4 +132,4 @@ If you have any questions or feedback, feel free to reach out or post an issue!
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---
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- Happy plotting! 🎉
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+ Happy plotting! 🎉
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