_config.yml

# --- General options --- #

# url is the full website URL
# baseurl is the website's URL without the hostname

# If you are building a simple GitHub user page (http://username.github.io) then use these settings:
url: "https://jyanglab.com"
baseurl: ""

# If you are building a GitHub project page then use these settings:
#url: "http://username.github.io/projectname"
#baseurl: "/projectname"

# Of course don't forget to change the username and projectname to YOUR username and project

# Name of website
title: The J.Yang Lab @UNL

# Short description of your site
description: Plant Quantitative Genetics and Population Genomics

# --- Navigation bar options --- #

# List of links in the navigation bar
navbar-links:
  People: "people"
  Research: "research"
  Publications: "pub"
  News: "news"
  Teaching: 
    - Courses: "teaching"
    - AGRO931: "agro931"
    - AGRO932: "agro932"
  Resources:
    - Lab Blog: "labdoc/index"
    - Software: "software"
    - JC (Q.U.I.T.): "jc"
    #- Lab Tutorial: "JYang-Lab-tutorial"
    #- Learn markdown: "http://www.markdowntutorial.com/"
    #- ZeaBigData: "https://zeabigdata.org/"
    #- CGMonline: "https://cgmonline.co/"
nav-search: "search"
#Lab Doc: "random/index"

# Image to show in the navigation bar - image must be a square (width = height)
# Remove this parameter if you don't want an image in the navbar
# avatar: "/img/logo_sq2.png"

# --- Footer options --- #

# Change all these values or delete the ones you don't want.
# Important: you must keep the "name" parameter, everything else you can remove
author:
  name: Jinliang Yang
  email: "yangjl0930@gmail.com"
  #facebook: yourname  # eg. daattali
  github: jyanglab    # eg. daattali
  twitter: JinliangYang   # eg. daattali
  reddit: yourname    # eg. daattali
  google-plus: +yourname   # eg. +DeanAttali or 109424658772469020925
  linkedin: yourname  # eg. daattali
  xing: yourname      # eg. daattali
  stackoverflow: yourlink  # eg. "3943160/daattali"
  snapchat: yourname  # eg. daattali
  instagram: yourname # eg. daattali
  youtube: yourlink   # eg. user/daattali or channel/daattali
  spotify: yourname   # eg. daattali
  telephone: yourphone   # eg. +14159998888
  unl: "https://agronomy.unl.edu/"

# Select which links to show in the footer
footer-links-active:
  rss: false
  facebook: false
  email: true
  twitter: true
  google-plus: false
  github: true
  reddit: false
  linkedin: false
  xing: false
  stackoverflow: false
  snapchat: false
  instagram: false
  youtube: false
  spotify: false
  telephone: false
  unl: true

# Select which share links to show in posts
share-links-active:
  twitter: true
  facebook: true
  google: false
  linkedin: true

# How to display the link to the website in the footer
# Remove this if you don't want a link in the footer
url-pretty: "agronomy.unl.edu/"  # eg. "deanattali.com/beautiful-jekyll"

# --- Misc --- #
# Fill in your Disqus shortname (NOT the userid) if you want to support Disqus comments
disqus: "yangjl"

# Fill in your Google Analytics ID to track your website using GA
google_analytics: "UA-48206713-5"

# Facebook App ID
# fb_app_id: ""

# Excerpt Word Length
# Truncates the excerpt to the specified number of words on the index page
excerpt_length: 50

# --- Don't need to touch anything below here (but you can if you want) --- #

# Output options (more information on Jekyll's site)
timezone: "America/Vancouver"
markdown: kramdown
highlighter: rouge
permalink: /:year-:month-:day-:title/
paginate: 10
paginate_path: "/labdoc/page:num/"

kramdown:
  input: GFM

# Default YAML values (more information on Jekyll's site)
defaults:
  -
    scope:
      path: ""
      type: "posts"
    values:
      layout: "post"
      comments: true  # add comments to all blog posts
      social-share: true # add social media sharing buttons to all blog posts
  -
    scope:
      path: "" # all files
    values:
      layout: "page"
      show-avatar: true

# Use tags pages (not recommended if you are deploying via GitHub pages, only set to true if deploying locally with ruby)
link-tags: false

# Exclude these files from production site
exclude:
  - Gemfile
  - Gemfile.lock
  - LICENSE
  - README.md
  - CNAME
  - Vagrantfile
  - node_modules
  - vendor/bundle/
  - vendor/cache/
  - vendor/gems/
  - vendor/ruby/
  - .Rproj.user/

# prose.io config
prose:
  rooturl: '_posts'
  media: 'img'
  ignore:
    - 404.html
    - LICENSE
    - feed.xml
    - _config.yml
    - /_layouts
    - /_includes
    - /css
    - /img
    - /js
  metadata:
    _posts:
      - name: "layout"
        field:
          element: "hidden"
          value: "post"
      - name: "title"
        field:
          element: "text"
          label: "Post title"
          placeholder: "Title"
          alterable: true
      - name: "subtitle"
        field:
          element: "textarea"
          label: "Subtitle"
          placeholder: "A description of your post."
          alterable: true
      - name: "date"
        field:
          element: "text"
          label: "Date"
          help: "Enter date of post."
          placeholder: "yyyy-mm-dd"
          alterable: true
      - name: "published"
        field:
          element: "checkbox"
          label: "Publish"
          help: "Check to publish post, uncheck to hide."

plugins:
  - jekyll-paginate