Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

The SLIDE-seq V2 data #56

Open
uuup111 opened this issue Dec 22, 2022 · 0 comments
Open

The SLIDE-seq V2 data #56

uuup111 opened this issue Dec 22, 2022 · 0 comments

Comments

@uuup111
Copy link

uuup111 commented Dec 22, 2022

Hello,

We are doing a similar study to SpaGCN and trying to compare it in our experimental results. But for all our brains and efforts, we couldn't find the SLIDE-seqV2 data that SpaGCN used. Is it convenient for you to provide the SLIDE-SeqV2 data used by SpaGCN?

The information about this data is presented in Supplementary Table 1 as follows: "
Species:Mouse.
Tissue: Contex.
Data Source: Stickels, R.R., et al. [3] (https://singlecell.broadinstitute.org/single_cell/study/SCP815/highly-sensitive-spatial-transcriptomics-at-near-cellular-resolution-with-slideseqv2#study-summary)
Dimensions: 2560 spots and 22683 genes.
Protocol: SLIDE-seqV2.
"

Thanks

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant