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Remove obsolete TODOs
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TODO.md

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TODOs
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Before 1.0
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Code:
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* [x] Replace rm calls by deleteDir in Pipeline 1.11
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* [x] Replace "loadLib()" by "loadFile()" (etc.) in order to address the comments from @jglick
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Documentation:
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* [x] Add sample Pipeline files to this repo
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* [x] Reflect new commands in the doc
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Medium-term TODOs (ETA is TBD)
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* [ ] Bulk loading command (proposed by @tfennely)

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