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NAMESPACE
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importFrom(tibble, rownames_to_column)
importFrom(tibble, column_to_rownames)
importFrom(tibble, remove_rownames)
importFrom(tibble, as.tibble)
importFrom(data.table, as.data.table)
importFrom(data.table, data.table)
importFrom(tidyr, gather)
importFrom(tidyr, spread)
importFrom(dplyr, left_join)
importFrom(dplyr, summarize)
importFrom(dplyr, select)
importFrom(dplyr, group_by)
importFrom(dplyr, group_by_)
importFrom(dplyr, filter)
importFrom(dplyr, mutate)
importFrom(dplyr, rename)
importFrom(magrittr,`%>%`)
importFrom(zCompositions, cmultRepl)
importFrom(ape,read.tree)
importFrom(ape,plot.phylo)
importFrom(ape, pcoa)
importFrom(ape, makeNodeLabel)
importFrom(ape, drop.tip)
importFrom(Biostrings, DNAStringSet)
importFrom(Biostrings, writeXStringSet)
importFrom(DECIPHER, AlignSeqs)
importFrom(phangorn, phyDat)
importFrom(phangorn, dist.ml)
importFrom(phangorn, NJ)
importFrom(phangorn, pml)
importFrom(phangorn, optim.pml)
importFrom(phangorn, midpoint)
importFrom(vegan, vegdist)
importFrom(vegan, adonis)
importFrom(vegan, rrarefy)
importFrom(vegan, diversity)
importFrom(vegan, specnumber)
importFrom(vegan, estimateR)
importFrom(picante, pd)
importFrom(philr, philr)
importFrom(philr, name.balance)
importFrom(DT, datatable)
importFrom(ggplot2, ggplot)
importFrom(ggplot2, aes)
importFrom(ggplot2, geom_bar)
importFrom(ggplot2, geom_point)
importFrom(ggplot2, geom_errorbar)
importFrom(ggplot2, geom_tile)
importFrom(ggplot2, geom_freqpoly)
importFrom(ggplot2, element_blank)
importFrom(ggplot2, xlab)
importFrom(ggplot2, ylab)
importFrom(ggplot2, labs)
importFrom(ggplot2, scale_fill_gradientn)
importFrom(ggplot2, scale_fill_manual)
importFrom(ggplot2, facet_grid)
importFrom(ggplot2, facet_wrap)
importFrom(ggplot2, theme)
importFrom(ggplot2, theme_bw)
importFrom(ggplot2, theme_classic)
importFrom(ggplot2, element_text)
importFrom(ggplot2, ggtitle)
importFrom(ggplot2, facet_wrap)
importFrom(phyloseq, rarefy_even_depth)
importFrom(phyloseq, otu_table)
importFrom(phyloseq, UniFrac)
importFrom(phyloseq, phyloseq)
importFrom(phyloseq, distance)
importFrom(phyloseq, prune_taxa)
importFrom(plotly, plot_ly)
importFrom(plotly, layout)
importFrom(rtk, rtk)
# Generated by roxygen2: do not edit by hand
export(TidyConvert.WhatAmI)
export(TidyConvert.ToMatrix)
export(TidyConvert.ToDataFrame)
export(TidyConvert.ToDataTable)
export(TidyConvert.ToTibble)
export(Confidence.Filter)
export(Fraction.Filter)
export(Make.CLR)
export(Make.Percent)
export(Make.Proportion)
export(Make.Tree.Fast)
export(Make.Tree.R)
export(PCoA)
export(PCoA3D)
export(Subsample.Table)
export(Multiple.Subsample.Table)
export(Summarize.Taxa)
export(Read.Filter)
export(Merge.Replicates)
export(Microbiome.Heatmap)
export(Nice.Table)
export(Microbiome.Barplot)
export(The.Works)
export(theme_MicrobeR)
export(mean_sd)