Files

 master

/

alignment

/

Copy path

Directory actions

More options

Directory actions

More options

Latest commit

bqminh

Fix an edge case with -o option when the outgroup is identical to ano…

Jul 4, 2019

62cb912 · Jul 4, 2019

History

History

/

alignment

/

Top

Folders and files

Name		Name	Last commit message	Last commit date
parent directory ..
CMakeLists.txt		CMakeLists.txt	fix compilation error	May 6, 2017
alignment.cpp		alignment.cpp	Fix an edge case with -o option when the outgroup is identical to ano…	Jul 4, 2019
alignment.h		alignment.h	For tree testing: include original alignment into the bootstrap samples	Oct 22, 2018
alignmentpairwise.cpp		alignmentpairwise.cpp	Fix bug in computing ML distances (.mldist) for +I or +R models	Jul 4, 2019
alignmentpairwise.h		alignmentpairwise.h	create utils folder	May 6, 2017
maalignment.cpp		maalignment.cpp	move all Alignment classes into alignment source code sub-folder	May 6, 2017
maalignment.h		maalignment.h	refactor partition name, model_name into Alignment class. New runMode…	Apr 18, 2018
pattern.cpp		pattern.cpp	move all Tree classes into tree sub-folder	May 6, 2017
pattern.h		pattern.h	move all Tree classes into tree sub-folder	May 6, 2017
superalignment.cpp		superalignment.cpp	Fix an edge case with -o option when the outgroup is identical to ano…	Jul 4, 2019
superalignment.h		superalignment.h	For tree testing: include original alignment into the bootstrap samples	Oct 22, 2018
superalignmentpairwise.cpp		superalignmentpairwise.cpp	move all Alignment classes into alignment source code sub-folder	May 6, 2017
superalignmentpairwise.h		superalignmentpairwise.h	move all Tree classes into tree sub-folder	May 6, 2017
superalignmentpairwiseplen.cpp		superalignmentpairwiseplen.cpp	move all Alignment classes into alignment source code sub-folder	May 6, 2017
superalignmentpairwiseplen.h		superalignmentpairwiseplen.h	move all Tree classes into tree sub-folder	May 6, 2017
View all files