From 26e3bfbc79a4303d9d3e6e01bf3897c312962cbe Mon Sep 17 00:00:00 2001 From: Chuck McCallum Date: Fri, 12 Apr 2019 14:55:58 -0400 Subject: [PATCH] Does not seem like it could actually write to output before. (Docker does not actually run for me: https://github.com/higlass/clodius/issues/51) --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index 30958301..46cee8a2 100644 --- a/README.md +++ b/README.md @@ -65,11 +65,11 @@ docker rm clodius; docker pull gehlenborglab/clodius # Ensure that you have the latest. -docker run -v /tmp/clodius/input:/tmp/ \ +docker run -v /tmp/clodius/:/tmp/ \ gehlenborglab/clodius \ - clodius aggregate bigwig /tmp/file.bigwig + clodius aggregate bigwig /tmp/input/file.bigwig -ls /tmp/clodius/input # Should contain the output file +ls /tmp/clodius/output # Should contain the output file ``` If you already have a good location for your input and output files,