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Merge pull request #144 from haesleinhuepf/git-bob-mod-LzSwXHn6Po
Fix for curtain slider overwriting left-side image in stackview.
2 parents a81a2a3 + e0b38c8 commit 3ad4a4b

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+17
-24
lines changed

3 files changed

+17
-24
lines changed

setup.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -5,7 +5,7 @@
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setuptools.setup(
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name="stackview",
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version="0.12.1",
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version="0.14.0",
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author="Robert Haase",
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author_email="[email protected]",
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description="Interactive image stack viewing in jupyter notebooks",

stackview/__init__.py

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Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
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__version__ = "0.12.1"
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__version__ = "0.14.0"
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from ._static_view import jupyter_displayable_output, insight
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from ._utilities import merge_rgb

stackview/_curtain.py

Lines changed: 15 additions & 22 deletions
Original file line numberDiff line numberDiff line change
@@ -1,4 +1,3 @@
1-
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def curtain(
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image,
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image_curtain,
@@ -8,14 +7,14 @@ def curtain(
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display_height: int = None,
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continuous_update: bool = True,
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alpha: float = 1,
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zoom_factor :float = 1.0,
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zoom_spline_order :int = 0,
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colormap:str = None,
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display_min:float = None,
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display_max:float = None,
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curtain_colormap:str = None,
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curtain_display_min:float = None,
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curtain_display_max:float = None
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zoom_factor: float = 1.0,
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zoom_spline_order: int = 0,
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colormap: str = None,
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display_min: float = None,
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display_max: float = None,
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curtain_colormap: str = None,
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curtain_display_min: float = None,
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curtain_display_max: float = None
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):
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"""Show two images and allow with a slider to show either the one or the other image.
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@@ -90,26 +89,20 @@ def curtain(
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viewer = None
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from ._image_widget import _img_to_rgb
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def transform_image():
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image_slice = _img_to_rgb(viewer.get_view_slice(), colormap=colormap, display_min=display_min, display_max=display_max)
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image_slice = _img_to_rgb(viewer.get_view_slice(), colormap=colormap, display_min=display_min, display_max=display_max).copy()
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image_slice_curtain = _img_to_rgb(viewer.get_view_slice(image_curtain), colormap=curtain_colormap, display_min=curtain_display_min, display_max=curtain_display_max)
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image_slice[:, curtain_slider.value:] = (1 - alpha) * image_slice[:, curtain_slider.value:] + \
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alpha * image_slice_curtain[:, curtain_slider.value:]
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return image_slice
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#if len(image.shape) < 3 or (len(image.shape) == 3 and image.shape[-1] == 3):
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# image_slice = _img_to_rgb(image.copy(), colormap=colormap, display_min=display_min, display_max=display_max)
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# image_slice_curtain = _img_to_rgb(image_curtain, colormap=curtain_colormap, display_min=curtain_display_min, display_max=curtain_display_max)
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#else:
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# image_slice = _img_to_rgb(np.take(image, slice_slider.value, axis=axis), colormap=colormap, display_min=display_min, display_max=display_max)
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# image_slice_curtain = _img_to_rgb(np.take(image_curtain, slice_slider.value, axis=axis), colormap=curtain_colormap, display_min=curtain_display_min, display_max=curtain_display_max)
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#return image_slice
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composited_image = image_slice.copy()
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composited_image[:, curtain_slider.value:] = (1 - alpha) * composited_image[:, curtain_slider.value:] + \
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alpha * image_slice_curtain[:, curtain_slider.value:]
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return composited_image
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viewer = _SliceViewer(image, continuous_update=continuous_update, zoom_factor=zoom_factor,
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zoom_spline_order=zoom_spline_order, colormap=colormap, display_min=display_min,
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display_max=display_max)
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view = viewer.view #ImageWidget(transform_image(), zoom_factor=zoom_factor, zoom_spline_order=zoom_spline_order)
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view = viewer.view # ImageWidget(transform_image(), zoom_factor=zoom_factor, zoom_spline_order=zoom_spline_order)
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sliders = viewer.slice_slider
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# event handler when the user changed something:

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