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Support GRCH37 to 38 conversion #4

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kkrysiak opened this issue May 17, 2018 · 2 comments
Open

Support GRCH37 to 38 conversion #4

kkrysiak opened this issue May 17, 2018 · 2 comments
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@kkrysiak
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We've had users request that we provide GRCH38 coordinates. So either a query that could find CIViC evidence using 38 coordinates as a query, or a CIViC converter that just supplies EIDs of interest with 38 coordinates annotated as well (potentially the whole dataset).

@ahwagner
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ahwagner commented Dec 5, 2019

We intend to support this in a future version, we will also support queries by CA ids, and both types of query will operate through the allele registry for normalization to GRCh37, the CIViC standard.

@ahwagner ahwagner added this to the v1.1 milestone Dec 18, 2019
@ahwagner ahwagner modified the milestones: v1.1, v1.2 May 13, 2020
@susannasiebert
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PR #73 add this functionality for single coordinate searches. It isn't yet supported for bulk coordinate searches.

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