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‎CONTRIBUTING.md

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# Contributing
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You are very welcome to contribute to this repository.
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## How to contribute?
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This can be done in several ways, depending on how familiar you are with
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the GitHub workflow:
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* simply send an [email](geertjan.bex@uhasselt.be),
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* [create an issue](https://help.github.com/articles/creating-an-issue/)
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on GitHub, or
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* [fork the repository](https://help.github.com/articles/fork-a-repo/)
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on GitHub, create a branch based on the development
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branch, make your contribution, and submit a
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[pull request](https://help.github.com/articles/about-pull-requests/).
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For pull requests, a few things should be noted:
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* you may be asked to modify your contribution to fit better into
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the context,
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* please base them on the development branch,
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* please ensure your branch is in sync with the upstream development
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branch before submitting the pull request,
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* please try to use [informative commit messages](https://chris.beams.io/posts/git-commit/)
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(I'm not claiming that mine are shining examples, but well...), and
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* if you want to suggest modifications to PowerPoint presentations,
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please make a copy of the original presentation, modify it, and add it.
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Since from `git`'s perspective, PowerPoint files are just binary files,
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a merge can only be done using Microsoft's PowerPoint application by
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comparing two PowerPoint files.
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Of course, although all contributions are very much appreciated, some of
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them might not be integrated into the material. If that should happen,
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I'll try to justify that decision, and it can be discussed.
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## Citation and licensing
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For contributions in general,
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* if you make a contribution, this will be mentioned in the
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[README](README.md), unless requested otherwise;
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* contributions will be under the same [license as this repository](LICENSE).
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## What can you contribute?
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Basically, anything you like, e.g.,
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* corrections of typos,
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* bug fixes in sample code,
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* additional sample code,
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* extra or alternative slides in presentations,
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* a section in a presentation,
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* a new subject, or aspect of an existing subject.

‎LICENSE

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‎README.md

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# Scientific Python
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GitHub repository for participants of the "Scientific Python" training.
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For information on the training, see the website
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[https://gjbex.github.io/Scientific-Python/](https://gjbex.github.io/Scientific-Python/)
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## What is it?
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1. [`scientific_python.pptx`](scientific_python.pptx): PowerPoint
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presentation used for the training.
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1. [`hands-on`](hands-on): directory that contains material for the hands-on sessions.
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1. [`source-code`](source-code): directory that contains sample code written to
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develop the slides and illustrate concepts.
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1. [License](LICENSE): license information for the material in this repository.
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1. [Contributing](CONTRIBUTING.md): information on how to contribute to this
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repository.
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1. docs: directory containing the website for this repository.

‎docs/README.md

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The Python programming language is increasingly popular. It is a
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versatile language for general purpose programming and accessible
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for novice programmers. However, it is also increasingly used for
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applications in the domain of scientific computing.
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This training introduces modules that are useful in that context.
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## Learning outcomes
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When you complete this training you will
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* be able to use numpy to represent and compute with multidimensional
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arrays;
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* have an overview of the scope of scipy;
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* be able to create data visualizations with matplotlib and bokeh;
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* be able to use sympy to do symbolic computations;
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* be able to represent and manipulate data in HDF5 format;
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* know how to start on an image or video manipulation project.
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## Schedule
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Total duration: 4 hours.
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| Subject | Duration |
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|---------------------------------------------|----------|
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| introduction and motivation | 5 min. |
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| numpy | 80 min. |
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| scipy | 25 min. |
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| coffee break | 10 min. |
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| matplotlib & bokeh | 30 min. |
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| sympy | 25 min. |
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| HDF5 | 40 min. |
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| scikit-image & OpenCV | 20 min. |
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| wrap up | 10 min. |
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## Training materials
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Slides are available in the
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[GitHub repository](https://github.com/gjbex/Scientific-Python),
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as well as example code and hands-on material.
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## Target audience
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This training is for you if you need to use Python for scientific
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computing.
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## Prerequisites
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You will need experience programming in Python. This is not a training that starts
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from scratch.
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If you plan to do Python programming in a Linux or HPC environment you should
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be familiar with these as well.
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## Trainer(s)
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* Geert Jan Bex ([geertjan.bex@uhasselt.be](mailto:geertjan.bex@uhasselt.be))

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