DESCRIPTION

Package: projectR
Type: Package
Title: Functions for the projection of weights from PCA, CoGAPS, NMF,
    correlation, and clustering
Version: 1.23.1
Author: Gaurav Sharma, Charles Shin, Jared Slosberg, Loyal Goff, Genevieve Stein-O'Brien
Authors@R: c(
    person("Gaurav", "Sharma", role = c("aut")),
    person("Charles", "Shin", role = c("aut")),
    person("Jared", "Slosberg", role = c("aut")),
    person("Loyal", "Goff", role = c("aut")),
    person("Ryan", "Palaganas", role = c("aut")),
    person("Genevieve", "Stein-O'Brien", role = c("aut", "cre" ), email = "gsteinobrien@gmail.com")
    )
Description: Functions for the projection of data into the spaces defined by PCA, CoGAPS, NMF, correlation, and clustering.
License: GPL (==2)
Imports:
    SingleCellExperiment,
    methods,
    cluster,
    stats,
    limma,
    NMF,
    ROCR,
    ggalluvial,
    RColorBrewer,
    dplyr,
    fgsea,
    reshape2,
    viridis,
    scales,
    Matrix,
    MatrixModels,
    msigdbr,
    ggplot2,
    cowplot,
    ggrepel,
    umap,
    tsne
Suggests:
    BiocStyle,
    CoGAPS,
    gridExtra,
    grid,
    testthat,
    devtools,
    knitr,
    rmarkdown,
    ComplexHeatmap,
    gplots,
    SeuratObject
LazyData: TRUE
LazyDataCompression: gzip
RoxygenNote: 7.3.2
Encoding: UTF-8
VignetteBuilder: knitr
biocViews: FunctionalPrediction, GeneRegulation, BiologicalQuestion, Software
BugReports: https://support.bioconductor.org/t/projectR/
URL: https://github.com/genesofeve/projectR/
Depends: 
    R (>= 4.0.0)