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Reactome2GO: Pipeline for updating Reactome models #11

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kltm opened this issue Oct 14, 2022 · 1 comment
Open

Reactome2GO: Pipeline for updating Reactome models #11

kltm opened this issue Oct 14, 2022 · 1 comment
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Needs LA approval Needs final approval from the Lead Architect Needs PM approval Needs final approval from the Project Manager Needs tech doc

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@kltm
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kltm commented Oct 14, 2022 •
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Project link

https://github.com/orgs/geneontology/projects/169

Project description

This project tracks the tasks needed to complete Reactome GO-CAM model updates. It will be an ongoing project with milestones of completion at each Reactome release.

PI

Peter D.

Project owner (PO)

David

Technical lead (TL)

Dustin

Other personnel (OP)

Tremayne

Technical specs

https://docs.google.com/document/d/1kwMOCdafV5SReRqD-kIlB5V9fKVx_nC0YKZQbiY5keE/edit

Other comments

This includes the the pythonification of biopax 2 go-cam.
@kltm kltm moved this to Active in Project Metadata Overview Oct 14, 2022
@kltm kltm changed the title Reactome2GO: Pipeline for updating Reactome models Private Reactome2GO: Pipeline for updating Reactome models Oct 26, 2022
@kltm kltm added Needs LA approval Needs final approval from the Lead Architect Needs PM approval Needs final approval from the Project Manager Needs tech doc and removed Issue incomplete labels Oct 27, 2022
@pgaudet pgaudet moved this from Active to Collaborations in Project Metadata Overview Nov 3, 2022
@dustine32
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I've started a rough draft tech spec for implementing BioPAX2GO-CAM in python:
https://docs.google.com/document/d/1cDM_cF7vuHZMHzESBHRN1yeW0NJckHCRQyzZRHaBs0w/edit

This doc is currently in more of a brainstorm format.

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Needs LA approval Needs final approval from the Lead Architect Needs PM approval Needs final approval from the Project Manager Needs tech doc
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@dustine32 @kltm