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RDF MTW Data model

filipk edited this page Mar 22, 2019 · 30 revisions

MTW Namespaces

PREFIX text: <http://jena.apache.org/text#>

PREFIX meshx: <configurable for each target language>

  • used for Terms & custom Concepts URIs
  • value is uuid.uuid4()

PREFIX mesht: <http://www.medvik.cz/schema/mesh/vocab/#>

mesht: Predicates

Language tag is used for non-english literal values ie. @cs

* denotes custom predicates - otherwise a property has the same definition and usage as the official meshv:predicates

mesht:active - Custom Concept and its Terms property

  • deleted ONLY - always: false

mesht:annotation - Descriptor property

mesht:concept - Descriptor property

mesht:considerAlso - Descriptor property

mesht:dateCreated - Term property

mesht:dateUpdated - Term property

mesht:historyNote - Descriptor property

mesht:identifier - Term property

  • only retained from XML
  • not used with newly translated terms as this identifier is optional by UMLS TSV spec

mesht:lexicalTag - Term property

*mesht:lockedBy - Descriptor property

  • if exists/true indicates a MTW user is working on the descriptor

mesht:narrowerConcept - Concept property

*mesht:notTranslatable - Concept property

  • if exists/true a MTW user stated the concept is not translatable

mesht:prefLabel - Term property

mesht:preferredTerm - Concept property

mesht:relatedConcept - Concept property

mesht:scopeNote - Concept property

mesht:term - Concept property

*mesht:translatorsNote - Concept/Descriptor property

  • custom translators non-public/internal note

Examples [simplified]

Translated preferrered term extracted from czedesc2019.xml

mesh:M0025841 
    mesht:preferredTerm   meshx:cze0019091

meshx:cze0019091
    mesht:prefLabel   "rotátorová manžeta"@cs

meshx:cze0019091 
    mesht:dateCreated   "2006-03-22"^^<http://www.w3.org/2001/XMLSchema#date>

meshx:cze0019091
    mesht:identifier   "cze0019091"

Terms newly translated in MTW

### preferred term
mesh:M000611436 
    mesht:preferredTerm   meshx:3e0d87cf-fe1f-4909-ad4d-905eeaa1c3ae

meshx:3e0d87cf-fe1f-4909-ad4d-905eeaa1c3ae 
    mesht:prefLabel   "musculus teres minor"@cs 

meshx:3e0d87cf-fe1f-4909-ad4d-905eeaa1c3ae 
    mesht:dateCreated   "2019-01-16"...

### non-pref term
mesh:M000611436 
    mesht:term   meshx: 4eb3597d-dc66-498e-924f-77c822ff0c28

meshx:4eb3597d-dc66-498e-924f-77c822ff0c28 
    mesht:prefLabel   "malý sval oblý"@cs 

meshx:4eb3597d-dc66-498e-924f-77c822ff0c28 
    mesht:dateCreated   "2019-01-16"...

Custom concept

mesh:D018806 
    mesht:concept   meshx:98ac2cab-5ca2-454d-b304-cfd8c4eefe48 

mesh:M0028159 
    mesht:narrowerConcept   meshx:98ac2cab-5ca2-454d-b304-cfd8c4eefe48 

meshx:98ac2cab-5ca2-454d-b304-cfd8c4eefe48 
    mesht:preferredTerm   meshx:b93f1c08-c65a-4a7f-9f02-732518225548 

meshx:98ac2cab-5ca2-454d-b304-cfd8c4eefe48 
    mesht:translatorsNote   "term is used, see e.g. https://www.ncbi.nlm.nih.gov/pubmed/16540951"@en 

meshx:98ac2cab-5ca2-454d-b304-cfd8c4eefe48 
    mesht:preferredTerm   meshx:b93f1c08-c65a-4a7f-9f02-732518225548 

meshx:b93f1c08-c65a-4a7f-9f02-732518225548 
    mesht:prefLabel   "APACHE IV"@cs 

meshx:b93f1c08-c65a-4a7f-9f02-732518225548 
    mesht:dateCreated "2019-01-11"^^http://www.w3.org/2001/XMLSchema#date 
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