update mpi version #406
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| name: cmake-build | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| pull_request: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| ubuntu: | |
| strategy: | |
| matrix: | |
| shared: [shared, static] | |
| boost: [boost, stdfs] | |
| mpi: [ | |
| mpi, | |
| serial | |
| ] | |
| profile: [ | |
| gcc11, | |
| clang14-libc++, | |
| clang14-libstdc++ | |
| ] | |
| runs-on: ubuntu-22.04 | |
| # container: | |
| # image: ${{ matrix.image }} | |
| # options: '--user=root' | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set environment variables | |
| run: | | |
| bash .github/workflows/set_env_vars.sh \ | |
| ${{ matrix.shared }} \ | |
| ${{ matrix.boost }} \ | |
| ${{ matrix.mpi }} \ | |
| ${{ matrix.profile }} | |
| # - name: Install MPI prerequisites | |
| # if: ${{ matrix.mpi == 'mpi' }} | |
| # run: | | |
| # apt-get update | |
| # apt-get install -y --no-install-recommends ssh | |
| - name: Install and configure conan | |
| run: | | |
| pip install --upgrade conan==2.0.2 | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/${{ matrix.profile }} \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan profile detect | |
| conan remove -c zlib/* | |
| conan lock create conanfile.py ${CONAN_ARGS} --lockfile-packages --lockfile-out base.lock | |
| conan lock create conanfile.py ${CONAN_ARGS} --build missing | |
| - name: cache conan dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.conan/data | |
| key: conan-${{ matrix.profile }}-${{ hashfiles('base.lock') }}-${{ hashFiles('conan.lock') }} | |
| restore-keys: | | |
| conan-${{ matrix.profile }}-${{ hashfiles('base.lock') }} | |
| conan-${{ matrix.profile }} | |
| - name: install conan dependencies | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/${{ matrix.profile }} \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan remove -c zlib/* | |
| conan install . ${CONAN_ARGS} \ | |
| --output-folder build \ | |
| --lockfile conan.lock \ | |
| --build missing \ | |
| --update | |
| - name: build with cmake | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/${{ matrix.profile }} \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan build . ${CONAN_ARGS} \ | |
| --lockfile conan.lock \ | |
| --output-folder build | |
| - name: run tests | |
| run: | | |
| cd build | |
| ctest --extra-verbose --no-tests=error | |
| windows-2019: | |
| strategy: | |
| matrix: | |
| shared: [ | |
| "shared", | |
| "static" | |
| ] | |
| boost: [ | |
| "boost", | |
| "stdfs" | |
| ] | |
| runs-on: windows-2019 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Add MSVC to PATH | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Set environment variables | |
| run: | | |
| bash .github/workflows/set_env_vars.sh \ | |
| ${{ matrix.shared }} \ | |
| ${{ matrix.boost }} | |
| - name: Install and configure conan | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade conan==2.0.2 | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2019 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan profile detect | |
| conan remove -c zlib/* | |
| conan lock create conanfile.py ${CONAN_ARGS} --lockfile-packages --lockfile-out base.lock | |
| conan lock create conanfile.py ${CONAN_ARGS} --build missing | |
| - name: cache conan dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.conan/data | |
| key: conan-vs2019-${{ hashfiles('base.lock') }}-${{ hashFiles('conan.lock') }} | |
| restore-keys: | | |
| conan-vs-2019-${{ hashfiles('base.lock') }} | |
| conan-vs-2019 | |
| - name: install conan dependencies | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2019 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan remove -c zlib/* | |
| conan install . ${CONAN_ARGS} \ | |
| --output-folder build \ | |
| --lockfile conan.lock \ | |
| --build missing \ | |
| --update \ | |
| --generator VirtualRunEnv | |
| - name: build with cmake | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2019 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan build . ${CONAN_ARGS} \ | |
| --lockfile conan.lock \ | |
| --output-folder build | |
| - name: run tests | |
| run: | | |
| cd build | |
| .\conanbuildenv-release-x86_64.ps1 | |
| .\conanrunenv-release-x86_64.ps1 | |
| ctest --extra-verbose --no-tests=error --output-on-failure | |
| shell: pwsh | |
| windows-2022: | |
| if: false | |
| strategy: | |
| matrix: | |
| shared: [ | |
| "shared", | |
| "static" | |
| ] | |
| boost: [ | |
| "boost", | |
| "stdfs" | |
| ] | |
| runs-on: windows-2022 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Add MSVC to PATH | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Set environment variables | |
| run: | | |
| bash .github/workflows/set_env_vars.sh \ | |
| ${{ matrix.shared }} \ | |
| ${{ matrix.boost }} | |
| - name: Install and configure conan | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade conan==2.0.2 | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2022 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan profile detect | |
| conan remove -c zlib/* | |
| conan lock create conanfile.py ${CONAN_ARGS} --lockfile-packages --lockfile-out base.lock | |
| conan lock create conanfile.py ${CONAN_ARGS} --build missing | |
| - name: cache conan dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.conan/data | |
| key: conan-vs2022-${{ hashfiles('base.lock') }}-${{ hashFiles('conan.lock') }} | |
| restore-keys: | | |
| conan-vs-2022-${{ hashfiles('base.lock') }} | |
| conan-vs-2022 | |
| - name: install conan dependencies | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2022 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan remove -c zlib/* | |
| conan install . ${CONAN_ARGS} \ | |
| --output-folder build \ | |
| --lockfile conan.lock \ | |
| --build missing \ | |
| --update \ | |
| --generator VirtualRunEnv | |
| - name: build with cmake | |
| run: | | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/vs2022 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${H5CPP_SHARED}" | |
| conan build . ${CONAN_ARGS} \ | |
| --lockfile conan.lock \ | |
| --output-folder build | |
| - name: run tests | |
| run: | | |
| cd build | |
| .\conanbuildenv-release-x86_64.ps1 | |
| .\conanrunenv-release-x86_64.ps1 | |
| ctest --extra-verbose --no-tests=error --output-on-failure | |
| shell: pwsh | |
| macos-13: | |
| strategy: | |
| matrix: | |
| shared: ["shared", "static"] | |
| boost: ["boost", "stdfs"] | |
| mpi: [ | |
| # "mpi", | |
| "serial" | |
| ] | |
| runs-on: macos-13 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.x' | |
| - name: Set environment variables | |
| run: | | |
| bash .github/workflows/set_env_vars.sh \ | |
| ${{ matrix.shared }} \ | |
| ${{ matrix.boost }} \ | |
| ${{ matrix.mpi }} | |
| - name: Install OpenMPI and prerequisites | |
| if: ${{ matrix.mpi == 'mpi' }} | |
| run: brew install open-mpi | |
| - name: Install and configure conan | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade conan | |
| # there's currently an issue running the MPI tests on OSX with HDF5 compiled | |
| # as a dynamic library. Use static HDF5 for now | |
| HDF5_SHARED=${H5CPP_SHARED} | |
| if [ "${H5CPP_WITH_MPI}" = "True" ]; then | |
| HDF5_SHARED=False | |
| fi | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/apple-clang12 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${HDF5_SHARED}" | |
| conan profile detect | |
| conan remove -c zlib/* | |
| conan lock create conanfile.py ${CONAN_ARGS} --lockfile-packages --lockfile-out base.lock | |
| conan lock create conanfile.py ${CONAN_ARGS} --build missing | |
| - name: cache conan dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.conan/data | |
| key: conan-apple-clang12-${{ hashfiles('base.lock') }}-${{ hashFiles('conan.lock') }} | |
| restore-keys: | | |
| conan-apple-clang12-${{ hashfiles('base.lock') }} | |
| conan-apple-clang12 | |
| - name: install conan dependencies | |
| run: | | |
| HDF5_SHARED=${H5CPP_SHARED} | |
| if [ "${H5CPP_WITH_MPI}" = "True" ]; then | |
| HDF5_SHARED=False | |
| fi | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/apple-clang12 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${HDF5_SHARED}" | |
| conan remove -c zlib/* | |
| conan install . ${CONAN_ARGS} \ | |
| --output-folder build \ | |
| --lockfile conan.lock \ | |
| --build missing \ | |
| --update \ | |
| --generator VirtualRunEnv | |
| - name: build with cmake | |
| run: | | |
| HDF5_SHARED=${H5CPP_SHARED} | |
| if [ "${H5CPP_WITH_MPI}" = "True" ]; then | |
| HDF5_SHARED=False | |
| fi | |
| CONAN_ARGS="--profile .github/workflows/conan/profiles/apple-clang12 \ | |
| -o with_boost=${H5CPP_WITH_BOOST} \ | |
| -o with_mpi=${H5CPP_WITH_MPI} \ | |
| -o shared=${H5CPP_SHARED} \ | |
| -o *:shared=${HDF5_SHARED}" | |
| conan build . ${CONAN_ARGS} \ | |
| --lockfile conan.lock \ | |
| --output-folder build | |
| - name: run tests | |
| run: | | |
| cd build | |
| ctest --extra-verbose --no-tests=error | |
| debian-12: | |
| strategy: | |
| matrix: | |
| shared: [shared, static] | |
| boost: [boost, stdfs] | |
| mpi: [ | |
| mpi, | |
| serial | |
| ] | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: debian:bookworm | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set environment variables | |
| run: | | |
| bash .github/workflows/set_env_vars.sh \ | |
| ${{ matrix.shared }} \ | |
| ${{ matrix.boost }} \ | |
| ${{ matrix.mpi }} | |
| - name: install serial prerequisites | |
| if: ${{ matrix.mpi == 'serial' }} | |
| run: | | |
| apt-get update | |
| apt-get -y install \ | |
| cmake \ | |
| catch2 \ | |
| g++ \ | |
| libhdf5-dev \ | |
| libboost-filesystem-dev \ | |
| wget | |
| - name: Install MPI prerequisites | |
| if: ${{ matrix.mpi == 'mpi' }} | |
| run: | | |
| apt-get update | |
| apt-get install -y --no-install-recommends \ | |
| build-essential \ | |
| cmake \ | |
| catch2 \ | |
| g++ \ | |
| libboost-filesystem-dev \ | |
| libhdf5-mpi-dev \ | |
| libopenmpi-dev | |
| - name: build with cmake | |
| run: | | |
| HDF5_STATIC=ON | |
| [ "${H5CPP_SHARED}" = "True" ] && HDF5_STATIC=OFF | |
| mkdir build | |
| cd build | |
| cmake .. \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DH5CPP_CONAN=DISABLE \ | |
| -DH5CPP_CATCH2_V2=TRUE \ | |
| -DHDF5_USE_STATIC_LIBRARIES=${HDF5_STATIC} \ | |
| -DH5CPP_BUILD_SHARED=${H5CPP_SHARED} \ | |
| -DH5CPP_WITH_BOOST=${H5CPP_WITH_BOOST} \ | |
| -DH5CPP_WITH_MPI=${H5CPP_WITH_MPI} | |
| cmake --build . -- -j 2 | |
| - name: run tests | |
| run: | | |
| ctest --extra-verbose --no-tests=error | |
| working-directory: build | |
| - name: install with cmake | |
| run: | | |
| cmake --build . --target install | |
| working-directory: build | |
| - name: build examples | |
| run: | | |
| mkdir examples_build | |
| cd examples_build | |
| cmake ../examples -DCMAKE_BUILD_TYPE=Release | |
| cmake --build . -- -j 2 |