index.qmd

---
title: "Epiverse-TRACE How-to guides"
fig-cap-location: top
listing: 
  - id: describe-cases
    contents: "analyses/describe_cases/*.qmd"
    type: table
    fields: [title]
  - id: quantify-transmission
    contents: "analyses/quantify_transmission/*.qmd"
    type: table
    fields: [title]
  - id: reconstruct-transmission
    contents: "analyses/reconstruct_transmission/*.qmd"
    type: table
    fields: [title]
  - id: forecast-cases
    contents: "analyses/forecast_cases/*.qmd"
    type: table
    fields: [title]
  - id: estimate-severity
    contents: "analyses/estimate_severity/*.qmd"
    type: table
    fields: [title]
  - id: simulate-transmission
    contents: "analyses/simulate_transmission/*.qmd"
    type: table
    fields: [title]
---

The Epiverse-TRACE **How-to guides** aim to collect recipe-like reproducible scripts to complete specific Outbreak analytics tasks following concrete steps using `R` packages. [^1] 

[^1]: Refer to the [About](about.qmd) page for more details about the rationale behind the design of this site.

## Describe case data

:::{#describe-cases}
:::

## Quantify transmission

:::{#quantify-transmission}
:::

## Reconstruct transmission

:::{#reconstruct-transmission}
:::

## Create short-term forecast

:::{#forecast-cases}
:::

## Estimate severity

:::{#estimate-severity}
:::

## Simulate transmission scenarios

:::{#simulate-transmission}
:::

## Contribute

Follow our guidelines on [Getting help](https://github.com/epiverse-trace/howto/blob/main/.github/SUPPORT.md) with and [Contributing](https://github.com/epiverse-trace/howto/blob/main/.github/CONTRIBUTING.md) to the `howto` repository.