From 592454f8a4a3cb017a053174427cbd561bc90041 Mon Sep 17 00:00:00 2001
From: Sebastian Funk <sebastian.funk@lshtm.ac.uk>
Date: Thu, 8 Apr 2021 15:34:10 +0100
Subject: [PATCH] keep NAs

---
 R/uk.R | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/R/uk.R b/R/uk.R
index 522a6b41..d64a3e44 100644
--- a/R/uk.R
+++ b/R/uk.R
@@ -119,12 +119,12 @@ Also adding new variable: hosp_new_first_admissions. This is NHS data for first
       ) %>%
       dplyr::group_by(date, region_level_1) %>%
       dplyr::summarise(
-        cases_new = sum(cases_new, na.rm = TRUE),
-        cases_total = sum(cases_total, na.rm = TRUE),
-        deaths_new = sum(deaths_new, na.rm = TRUE),
-        deaths_total = sum(deaths_total, na.rm = TRUE),
-        hosp_new = sum(hosp_new, na.rm = TRUE),
-        hosp_total = sum(hosp_total, na.rm = TRUE),
+        cases_new = sum(cases_new),
+        cases_total = sum(cases_total),
+        deaths_new = sum(deaths_new),
+        deaths_total = sum(deaths_total),
+        hosp_new = sum(hosp_new),
+        hosp_total = sum(hosp_total),
         .groups = "drop"
       )