-
Notifications
You must be signed in to change notification settings - Fork 3
/
day02-practicals.html
executable file
·61 lines (44 loc) · 2.08 KB
/
day02-practicals.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
<style type="text/css">body {
margin:20;
font-family: Arial, Helvetica, sans-serif;
}
p.todo{color:DarkRed;}
p{
background:#FFFFFF;
font-size:small;
color:Navy;
width:80%;
}
h2{color:Navy;}
h3{color:Navy;}
h4{color:DarkRed;}
code{
color: DarkSlateGray;
font-size:20;
}
ol {
background:#F8F8FF 2.3em 0 repeat-y;
overflow:auto;
font-size:small;
margin:0;
padding:1em 0 1em 2.8em;
color:gray;
width:90%;
}
#content ol li {
font-size:small;
color:gray;
}
#content ol code {color:#DCDCDC;font-size:medium;}
</style>
<h1>Practical Assignments - Day 2</h1>
<h2><span style="font-size:16px;">Tuesday 8th December: 13:30 - 17:30.</span></h2>
<p><span style="font-size:16px;"><strong><em>Introductory Assignments</em></strong> - Complete all sections.</span></p>
<p><span style="font-size:16px;">1) <a href="day2_colocalisation/2015_Imagej-Colocalisation-day02.html">Colocalisation practical</a></span></p>
<p><span style="font-size:16px;"> This practical is based on microscopy images and involves using Pearson's moment correlation to assess the colocalisation of images. Allow around 45 minutes for this.</span></p>
<p> </p>
<p><span style="font-size:16px;"><strong><em>Main Assignment</em></strong> - Choose only one from the MRI practical or from here (allow around two hours).</span></p>
<p style="font-size: 16px;"><span style="font-size: 16px;">2) 'Using your ipython notebook navigate to: day2_colocalisation/2015 Correlation and Colocalisation practical.ipynb'. </span></p>
<p><span style="font-size:16px;"> This practical is based on investigating correlation and colocalisation using python. Allow around 2 hours for this practical.</span></p>
<p><span style="font-size:16px;"> IPython notebook can be accessed using the following command in the terminal: /usr/local/anaconda2/bin/ipython notebook . Please navigate to where you cloned the repository before doing this. Let a demonstrator know if you need help doing this.</span></p>
<h4> </h4>