.gitignore

*.iml
.idea
*.class
*.swp
.DS_Store

# Contains SQL statements to initialize testing DB with a confidential user and tokens
# Contains SQL statements to initialize testing DB with a confidential user, assuming they followed the dockstore setup tutorial
*.sql

*.gradle
gradle.properties
AndroidManifest.xml

# Mobile Tools for Java (J2ME)
.mtj.tmp/

# Package Files #
*.jar
*.war
*.ear

# vscode
.vscode

# virtual machine crash logs, see http://www.java.com/en/download/help/error_hotspot.xml
hs_err_pid*
/target/
dependency-reduced-pom.xml
hello-world.yml
dockstore-webservice/target/
dockstore-client/target/
swagger-java-client/target/
dockstore-language-plugin-parent/target/
openapi-java-client/target/
openapi-java-wes-client/target/
dockstore-event-consumer/target/
dockstore-file-plugin-parent/target/
dockstore-cli-integration-testing/target/
dockstore-cli-integration-testing/cromwell-executions/
dockstore-cli-integration-testing/cromwell-input/
dockstore-cli-integration-testing/datastore/
dockstore-cli-reports/target/
target

# confidential testing files
# The dockstore CLI config file for testing confidential data
dockstore-cli-integration-testing/src/test/resources/dstesting_pcks8.pem
dockstore-cli-integration-testing/src/test/resources/config_file.txt
dockstore-cli-integration-testing/src/test/resources/config_file2.txt
dockstore-webservice/src/main/resources/migrations.test.confidential1.xml
dockstore-webservice/src/main/resources/migrations.test.confidential2.xml
dockstore-webservice/src/main/resources/migrations.test.confidential4.xml
dockstore-webservice/src/main/resources/migrations.test.confidential1_1.5.0.xml
dockstore-webservice/src/main/resources/migrations.test.confidential2_1.5.0.xml
dockstore-webservice/src/main/resources/migrations.test.confidential4_1.5.0.xml

# The dockstore.yml file for running the confidential tests
dockstore-cli-integration-testing/src/test/resources/dockstoreTest.yml

# The tarball of the above three confidential files
dockstore-cli-integration-testing/src/test/resources/secrets.tar
dockstore-client/Cromwell.stderr.txt
dockstore-client/Cromwell.stdout.txt
dockstore-client/datastore
dockstore-client/cromwell-executions