diff --git a/CMakeLists.txt b/CMakeLists.txt
index 8a7d7ca..920f238 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -1,7 +1,7 @@
 cmake_policy(SET CMP0091 NEW)
 set(CMAKE_FIND_NO_INSTALL_PREFIX TRUE FORCE)
 cmake_minimum_required(VERSION 3.16)
-project(tl2cgen LANGUAGES CXX C VERSION 0.3.0)
+project(tl2cgen LANGUAGES CXX C VERSION 0.3.1)
 
 set(CMAKE_MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>")
 
diff --git a/cmake/ExternalLibs.cmake b/cmake/ExternalLibs.cmake
index 5c26c59..54cdb8d 100644
--- a/cmake/ExternalLibs.cmake
+++ b/cmake/ExternalLibs.cmake
@@ -1,7 +1,7 @@
 include(FetchContent)
 
 # Treelite
-find_package(Treelite 3.4.0)
+find_package(Treelite 3.9.0)
 if (Treelite_FOUND)
   set(TREELITE_FROM_SYSTEM_ROOT TRUE)
   set(TREELITE_LIB treelite::treelite)
diff --git a/java_runtime/tl2cgen4j/pom.xml b/java_runtime/tl2cgen4j/pom.xml
index 29827e3..fd8c744 100644
--- a/java_runtime/tl2cgen4j/pom.xml
+++ b/java_runtime/tl2cgen4j/pom.xml
@@ -5,7 +5,7 @@
     <modelVersion>4.0.0</modelVersion>
     <groupId>ml.dmlc</groupId>
     <artifactId>tl2cgen4j</artifactId>
-    <version>0.3.0</version>
+    <version>0.3.1</version>
     <packaging>jar</packaging>
     <properties>
         <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
diff --git a/python/pyproject.toml b/python/pyproject.toml
index 2174b75..e3a86ee 100644
--- a/python/pyproject.toml
+++ b/python/pyproject.toml
@@ -7,7 +7,7 @@ build-backend = "packager.pep517"
 
 [project]
 name = "tl2cgen"
-version = "0.3.0"
+version = "0.3.1"
 authors = [
     {name = "Hyunsu Cho", email = "chohyu01@cs.washington.edu"}
 ]
diff --git a/python/tl2cgen/VERSION b/python/tl2cgen/VERSION
index 0d91a54..9e11b32 100644
--- a/python/tl2cgen/VERSION
+++ b/python/tl2cgen/VERSION
@@ -1 +1 @@
-0.3.0
+0.3.1