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CHANGELOG.md

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Changelog

Observes Semantic Versioning standard and Keep a Changelog convention.

0.3.3 - 2023-06-29

  • Add - Docker image ID
  • Add - VS Code extensions
  • Update - element-array-ephys version
  • Update - Tutorial notebook to work around bug

0.3.2 - 2023-04-14

  • Add - quality_metrics.ipynb for visualizing quality metrics.
  • Add - Documentation for attributes in ephys.QualityMetrics.Waveform.
  • Update - pytest for ephys.QualityMetrics.populate.

0.3.1 - 2023-04-12

  • Add - pytest for new QCmetric tables.
  • Add - graphviz in requirements.txt.
  • Update - visualization notebook.

0.3.0 - 2023-03-09

  • Add - Demo notebooks and capabilities using GitHub Codespaces
  • Add - pre-commit, markdown lint, and spell check config files
  • Update - Revise pytest and docker structure to streamline testing
  • Fix - element-array-ephys version error when installing via requirements.txt

0.2.6 - 2022-01-12

  • Update - Requirements to install main branch of element-array-ephys.
  • Add - Quality Metric plots to visualization notebook.

0.2.5 - 2022-01-03

  • Add - notebook 10 for figures and widget for ephys results.
  • Add - Test for ephys_report module.

0.2.4 - 2022-09-20

  • Add - Add 0.2.3 and revise 0.2.4 notebook for Allen Institute workshop

0.2.2 - 2022-09-18

  • Update - config ephys roots in notebooks for codebook deployment
  • Update - requirements.txt to add element electrode localization
  • Update - add lab.User insert to ingest.py for users with empty element-lab schemas

0.2.1 - 2022-07-22

  • Add - Mention CodeBook data directory in notebooks
  • Add - Mention of config items in notebook 09
  • Update - Remove directory assertion in notebooks for CodeBook deployment
  • Update - Move all export functions from pipeline to export script

0.2.0 - 2022-07-08

  • Add - Adopt black formatting into code base
  • Add - GitHub Issue templates
  • Add - Code of conduct
  • Add - Jupytext paired python scripts
  • Add - Example data for trials, events, blocks, recordings, and alignments
  • Add - Analysis schema
  • Add - Raster and PSTH plots
  • Add - Video tutorial link to README
  • Add - Images for README
  • Add - Jupyter notebooks for downstream analysis, electrode localization, and NWB export
  • Add - Electrode localization schema activation script
  • Update - README for ephys modes, element-event, and element-electrode-localization
  • Update - Docker and Compose files for element-event and element-electrode-localization
  • Update - Pipeline script for ephys mode and element-event
  • Update - Pytests

0.1.0 - 2022-06-02

  • Update - Docker and Compose files
  • Add - NWB export pytests

0.1.0a4 - 2022-01-21

  • Add - Create Docker and Compose files for active development.

0.1.0a3 - 2022-01-18

  • Update - Notebooks
  • Update - Move instructions to datajoint-elements/install.md.
  • Update - Docker and Compose files for new base image and added options to install specific forks for tests.

0.1.0a2 - 2021-04-12

  • Update - Pytests
  • Update - Change version to reflect release phase.

0.1.1 - 2021-03-26

  • Add - Version