bug fix on data.w and data.w_no_age, new site build

covid19br · Jun 18, 2022 · fc11169 · fc11169
1 parent 1f88d56
commit fc11169
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,9 +1,9 @@
 Package: nowcaster
-Title: Estimate not yet reported data from a delay distribution of already onset data
+Title: Nowcaster
 Version: 0.2.1
 Authors@R: c(
-    person("Leonardo", "Bastos", , "leonardo.bastos@fiocruz.br", role = c("aut"), comment = c(ORCID = "0000-0002-1406-0122")),
-    person("Rafael", "Lopes", , "rafael.lp.silva@unesp.br", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9416-6145")))
+    person("Rafael", "Lopes", , "rafael.lp.silva@unesp.br", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9416-6145")),
+    person("Leonardo", "Bastos", , "leonardo.bastos@fiocruz.br", role = c("aut"), comment = c(ORCID = "0000-0002-1406-0122")))
 Description: Nowcaster is a package wrapping statistical models to estimate not yet reported data from a empirical delay distribution 
   between dates of onset of symptoms and date of digitation.
 License: GPL (>= 3)

diff --git a/R/data_w.R b/R/data_w.R
@@ -22,8 +22,8 @@ data.w<-function(dataset,
                  date_onset,
                  date_report,
                  age_col,
-                 K,
-                 silent){
+                 K=0,
+                 silent=F){
   if(!silent){
     ## Last digitation date considered
     if(missing(trim.data)){

diff --git a/R/data_w_no_age.R b/R/data_w_no_age.R
@@ -18,8 +18,8 @@ data.w_no_age<-function(dataset,
                         trim.data,
                         date_onset,
                         date_report,
-                        K,
-                        silent){
+                        K=0,
+                        silent=F){
   if(!silent){
     ## Last digitation date considered
     if(missing(trim.data)){

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/LICENSE.html b/docs/LICENSE.html
diff --git a/docs/articles/forecasting.html b/docs/articles/forecasting.html
diff --git a/docs/articles/forecasting_files/figure-html/after_one_year-1.png b/docs/articles/forecasting_files/figure-html/after_one_year-1.png
diff --git a/docs/articles/forecasting_files/figure-html/unnamed-chunk-3-1.png b/docs/articles/forecasting_files/figure-html/unnamed-chunk-3-1.png
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/articles/nowcaster.html b/docs/articles/nowcaster.html
diff --git a/docs/articles/nowcaster_files/figure-html/epi-curve-plot-1.png b/docs/articles/nowcaster_files/figure-html/epi-curve-plot-1.png
diff --git a/docs/articles/nowcaster_files/figure-html/no_age_plot-1.png b/docs/articles/nowcaster_files/figure-html/no_age_plot-1.png
diff --git a/docs/articles/nowcasting_importance.html b/docs/articles/nowcasting_importance.html
diff --git a/docs/articles/nowcasting_importance_files/figure-html/after_one_year-1.png b/docs/articles/nowcasting_importance_files/figure-html/after_one_year-1.png
diff --git a/docs/articles/nowcasting_importance_files/figure-html/no_age_plot-1.png b/docs/articles/nowcasting_importance_files/figure-html/no_age_plot-1.png
diff --git a/docs/articles/structured_data.html b/docs/articles/structured_data.html
diff --git a/docs/articles/structured_data_files/figure-html/no_age_plot-1.png b/docs/articles/structured_data_files/figure-html/no_age_plot-1.png
diff --git a/docs/articles/structured_data_files/figure-html/plot-1.png b/docs/articles/structured_data_files/figure-html/plot-1.png