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Andrew RambautAndrew Rambaut
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adding WHO labels
1 parent ac56ab5 commit f64737f

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10 files changed

+60
-8
lines changed

10 files changed

+60
-8
lines changed

constellations/definitions/cB.1.1.7.json

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{
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"name": "B.1.1.7-like",
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"name": "Alpha (B.1.1.7-like)",
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"description": "B.1.1.7 lineage defining mutations",
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"sources": [
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"https://virological.org/t/563"

constellations/definitions/cB.1.351.json

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{
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"label": "B.1.351-like",
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"label": "Beta (B.1.351-like)",
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"description": "Defining of lineage B.1.351",
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"sources": [
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"https://www.medrxiv.org/content/10.1101/2020.12.21.20248640v1"
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{
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"label": "Epsilon (B.1.427/429-like)",
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"description": "",
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"sources": [
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null
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],
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"type": "variant",
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"variant": {
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"Pango-lineages": [
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"B.1.427",
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"B.1.429"
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],
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"WHO-label": "Epsilon",
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"representative-genome": ""
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},
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"tags": [
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"B.1.527",
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"B.1.529",
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"Eta"
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],
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"sites": [
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],
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"rules": {
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"min_alt": 5,
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"max_ref": 16
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}
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}

constellations/definitions/cB.1.525.json

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{
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"label": "B.1.525-like",
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"label": "Eta (B.1.525-like)",
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"description": "This variant is a cluster of E484K containing genomes",
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"sources": [
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null
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{
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"label": "Iota (B.1.526-like)",
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"description": "",
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"sources": [
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null
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],
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"type": "variant",
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"variant": {
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"Pango-lineages": [
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"B.1.526"
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],
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"WHO-label": "Eta",
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"representative-genome": ""
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},
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"tags": [
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"B.1.526",
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"Eta"
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],
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"sites": [
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],
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"rules": {
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"min_alt": 5,
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"max_ref": 16
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}
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}

constellations/definitions/cB.1.617.2+K417N.json

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{
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"label": "B.1.617.2-like+K417N",
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"label": "Delta (B.1.617.2-like) +K417N",
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"description": "Defining constellation for lineage B.1.617.2 with the addition of spike K417N",
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"sources": [
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"https://github.com/cov-lineages/pango-designation/issues/49"

constellations/definitions/cB.1.617.2.json

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{
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"label": "B.1.617.2-like",
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"label": "Delta (B.1.617.2-like)",
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"description": "Defining constellation for lineage B.1.617.2",
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"sources": [
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"https://github.com/cov-lineages/pango-designation/issues/49"

constellations/definitions/cP.1.json

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{
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"label": "P.1-like",
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"label": "Gamma (P.1-like)",
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"description": "Defining constellation for lineage P.1",
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"sources": [
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"https://virological.org/t/586",

constellations/definitions/cP.2.json

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{
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"label": "P.2-like",
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"label": "Zeta (P.2-like)",
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"description": "Defining constellation for lineage P.2",
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"sources": [
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null

constellations/definitions/cP.3.json

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{
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"label": "P.3-like",
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"label": "Theta (P.3-like)",
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"description": "Defining constellation for lineage P.3",
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"sources": [
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"https://github.com/cov-lineages/pango-designation/issues/27",

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