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DESCRIPTION
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Package: skeleSim
Type: Package
Title: Genetic Simulation Engine
Version: 0.9.9
Authors@R: c(
EA = person("Eric", "Archer", email = "[email protected]", role = c("aut")),
MDL = person("Michelle", "DePrenger-Levin", email = "[email protected]", role = c("aut")),
SH = person("Sean", "Hoban", email = "[email protected]", role = c("aut")),
LL = person("Libby", "Liggins", email = "[email protected]", role = c("aut")),
CP = person("Christian", "Parobek", email = "[email protected]", role = c("aut")),
AS = person("Allan", "Strand", email = "[email protected]", role = c("aut", "cre")))
URL: https://github.com/christianparobek/skeleSim
BugReports: https://github.com/christianparobek/skeleSim/issues
Description: A shiny interface and supporting tools to guide users in choosing
appropriate simulations, setting parameters, calculating summary genetic
statistics, and organizing data output, all within the R environment. In
addition to supporting existing forward and reverse-time simulators, new
simulators can be integrated into the environment relatively easily.
License: GPL-2
LazyLoad: Yes
LazyData: true
Depends:
R (>= 3.4.0),
igraph,
shiny (>= 0.13.0),
shinyFiles
Imports:
adegenet,
ape,
hierfstat,
pegas,
markdown,
methods,
reshape2,
rmetasim (>= 3.0.0),
strataG (>= 1.0),
swfscMisc (>= 1.1)
Suggests:
knitr,
rmarkdown,
RJSONIO
Collate:
skeleSim-package.R
skeleSim.classes.R
fsc.classes.R
rms.classes.R
skeleSim.internals.R
skeleSimGUI.R
analysis.funcs.R
fsc.loadScenario.R
fsc.run.R
fsc.scenarioCheck.R
rms.convert.R
rms.init.land.function.R
rms.init.landscape.R
rms.internals.R
rms.run.R
rms.scenarioCheck.R
runSim.R
skeleSim.checks.R
getGammaMutRates.R
VignetteBuilder: knitr
RoxygenNote: 6.0.1