diff --git a/README.md b/README.md index 0eeb18e2..9fcd9265 100644 --- a/README.md +++ b/README.md @@ -21,32 +21,7 @@ The project is structured as follows: ## `classfile-fingerprint` -### CLI - WILL BE DEPRECATED SOON - -> This component is not tested because it runs only jars that are executable -> and published on maven central. -> Maybe, in the future, we will add one jar as a resource so that it can be tested. - -```shell -java -jar classfile-fingerprint-0.8.1-SNAPSHOT.jar -``` - -#### Required parameters - -| Parameter | Type | Description | -|:-----------------:|:------:|--------------------------------------------| -| `-i` or `--input` | `File` | Path to the input SBOM in CycloneDX format | - -#### Optional parameters - -| Parameter | Type | Description | -|:-------------------------:|:--------:|--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| `-a` or `--algorithm` | `String` | Algorithm used to generate the hash sum. Default: `SHA256`.
All options are [written here](https://docs.oracle.com/en/java/javase/17/docs/specs/security/standard-names.html#messagedigest-algorithms). | -| `-o` or `--output` | `Path` | Path to the output file. Default: `classfile.sha256.jsonl` | -| `-e` or `--external-jars` | `Path` | Configuration file to specify external jars. Default: `null`. | - - -### Maven plugin +### Maven plugin - DEPRECATED #### Pom Configuration @@ -111,6 +86,30 @@ Run it as follows: java -javaagent:=fingerprints= -jar ``` +Works in two ways: + +### Generating fingerprint on the fly from SBOM + +**Required Parameters** + +| Parameter | Type | Description | +|:---------:|:------:|------------------------| +| `sbom` | `File` | Path to the sbom file. | + + +> `sbom` is a CycloneDX 1.4 JSON file. + +**Optional Parameters** + +| Parameter | Type | Description | +|:--------------:|:---------:|--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| `skipShutdown` | `boolean` | If `true`, the JVM will not shutdown if a prohibited class is loaded. Default: `false`. | +| `algorithm` | `String` | Algorithm used to generate the hash sum. Default: `SHA256`.
All options are [written here](https://docs.oracle.com/en/java/javase/17/docs/specs/security/standard-names.html#messagedigest-algorithms). | +| `externalJars` | `Path` | Configuration file to specify external jars. Default: `null`. | + + +### Using pre-generated fingerprints from maven plugin - DEPRECATED + **Required Parameters** | Parameter | Type | Description | @@ -122,6 +121,3 @@ java -javaagent:=fingerprints= -jar `sbom` is a CycloneDX 1.4 JSON file. diff --git a/classfile-fingerprint/pom.xml b/classfile-fingerprint/pom.xml index cf3dcd3e..0b5ca927 100644 --- a/classfile-fingerprint/pom.xml +++ b/classfile-fingerprint/pom.xml @@ -91,29 +91,6 @@ com.diffplug.spotless spotless-maven-plugin - - org.apache.maven.plugins - maven-shade-plugin - - false - - - - io.github.algomaster99.FromSbom - - - - ${project.artifactId}-${project.parent.version} - - - - - shade - - package - - - com.soebes.itf.jupiter.extension itf-maven-plugin diff --git a/classfile-fingerprint/src/main/java/io/github/algomaster99/FromSbom.java b/classfile-fingerprint/src/main/java/io/github/algomaster99/FromSbom.java deleted file mode 100644 index 59061c05..00000000 --- a/classfile-fingerprint/src/main/java/io/github/algomaster99/FromSbom.java +++ /dev/null @@ -1,99 +0,0 @@ -package io.github.algomaster99; - -import static io.github.algomaster99.terminator.commons.jar.JarScanner.goInsideJarAndUpdateFingerprints; -import static io.github.algomaster99.terminator.commons.jar.JarScanner.processExternalJars; - -import io.github.algomaster99.options.FromSbomOptions; -import io.github.algomaster99.terminator.commons.cyclonedx.Bom14Schema; -import io.github.algomaster99.terminator.commons.cyclonedx.Component; -import io.github.algomaster99.terminator.commons.fingerprint.ParsingHelper; -import io.github.algomaster99.terminator.commons.fingerprint.provenance.Provenance; -import io.github.algomaster99.terminator.commons.jar.JarDownloader; -import java.io.File; -import java.io.IOException; -import java.nio.file.Path; -import java.util.HashMap; -import java.util.List; -import java.util.Map; -import org.slf4j.Logger; -import org.slf4j.LoggerFactory; -import picocli.CommandLine; - -@Deprecated(since = "0.10.0", forRemoval = true) -@CommandLine.Command( - name = "from-sbom", - mixinStandardHelpOptions = true, - description = "Converts a CycloneDX SBOM to a fingerprint file.") -public class FromSbom implements Runnable { - private static final Logger LOGGER = LoggerFactory.getLogger(FromSbom.class); - - @CommandLine.Option( - names = {"-i", "--input"}, - required = true, - description = "Input SBOM file.") - private Path input; - - /** - * The algorithm to use for computing the hash. - * - * @see Possible values - */ - @CommandLine.Option( - names = {"-a", "--algorithm"}, - required = false, - description = "The algorithm to use for computing the hash.") - private String algorithm = "SHA256"; - - @CommandLine.Option( - names = {"-o", "--output"}, - required = false, - description = "The output file.") - private Path output = Path.of(String.format("classfile.%s.json", algorithm.toLowerCase())); - - @CommandLine.Option( - names = {"-e", "--external-jars"}, - required = false, - description = "Path to known external jars.") - private Path externalJars; - - public static void main(String[] args) { - int exitCode = new CommandLine(new FromSbom()).execute(args); - System.exit(exitCode); - } - - @Override - public void run() { - try { - FromSbomOptions options = new FromSbomOptions(input, algorithm, output, externalJars); - Map> fingerprints = getFingerprints(options); - ParsingHelper.serialiseFingerprints(fingerprints, options.getOutput()); - } catch (IOException e) { - throw new RuntimeException(e); - } - } - - public static Map> getFingerprints(FromSbomOptions options) { - Bom14Schema sbom = options.getInput(); - Map> fingerprints = new HashMap<>(); - if (options.getExternalJars() != null) { - processExternalJars(options.getExternalJars().toFile(), fingerprints, options.getAlgorithm()); - } - - for (Component component : sbom.getComponents()) { - try { - File jarFile = JarDownloader.getMavenJarFile( - component.getGroup(), component.getName(), component.getVersion()); - goInsideJarAndUpdateFingerprints( - jarFile, - fingerprints, - options.getAlgorithm(), - component.getGroup(), - component.getName(), - component.getVersion()); - } catch (IOException | InterruptedException e) { - throw new RuntimeException(e); - } - } - return fingerprints; - } -} diff --git a/classfile-fingerprint/src/main/java/io/github/algomaster99/options/FromSbomOptions.java b/classfile-fingerprint/src/main/java/io/github/algomaster99/options/FromSbomOptions.java deleted file mode 100644 index eea90b11..00000000 --- a/classfile-fingerprint/src/main/java/io/github/algomaster99/options/FromSbomOptions.java +++ /dev/null @@ -1,38 +0,0 @@ -package io.github.algomaster99.options; - -import io.github.algomaster99.terminator.commons.cyclonedx.Bom14Schema; -import io.github.algomaster99.terminator.commons.cyclonedx.CycloneDX; -import java.io.IOException; -import java.nio.file.Files; -import java.nio.file.Path; - -@Deprecated(since = "0.10.0", forRemoval = true) -public class FromSbomOptions { - private final Bom14Schema input; - private final String algorithm; - private final Path output; - private final Path externalJars; - - public FromSbomOptions(Path input, String algorithm, Path output, Path externalJars) throws IOException { - this.algorithm = algorithm; - this.input = CycloneDX.getPOJO(Files.readString(input)); - this.output = output; - this.externalJars = externalJars; - } - - public Bom14Schema getInput() { - return input; - } - - public String getAlgorithm() { - return algorithm; - } - - public Path getOutput() { - return output; - } - - public Path getExternalJars() { - return externalJars; - } -} diff --git a/classfile-fingerprint/src/test/java/io/github/algomaster99/FromSbomTest.java b/classfile-fingerprint/src/test/java/io/github/algomaster99/FromSbomTest.java deleted file mode 100644 index 5bad1646..00000000 --- a/classfile-fingerprint/src/test/java/io/github/algomaster99/FromSbomTest.java +++ /dev/null @@ -1,41 +0,0 @@ -package io.github.algomaster99; - -import static org.assertj.core.api.Assertions.assertThat; - -import io.github.algomaster99.options.FromSbomOptions; -import io.github.algomaster99.terminator.commons.fingerprint.ParsingHelper; -import io.github.algomaster99.terminator.commons.fingerprint.provenance.Provenance; -import java.io.IOException; -import java.nio.file.Files; -import java.nio.file.Path; -import java.util.List; -import java.util.Map; -import org.junit.jupiter.api.Test; -import org.junit.jupiter.api.io.TempDir; - -public class FromSbomTest { - - private static final Path TEST_RESOURCES = Path.of("src", "test", "resources"); - - @Test - void guava(@TempDir Path junitTempDir) throws IOException { - Path sbomFile = TEST_RESOURCES.resolve("guava").resolve("bom.json"); - - FromSbomOptions options = getDefaultOptions(sbomFile); - Map> fingerprints = FromSbom.getFingerprints(options); - - assertThat(fingerprints).size().isEqualTo(2454); - - String expectedContent = - Files.readString(TEST_RESOURCES.resolve("guava").resolve("expected-classfile.sha256.jsonl")); - Path actualFingerprint = junitTempDir.resolve("actual-classfile.sha256.jsonl"); - ParsingHelper.serialiseFingerprints(fingerprints, actualFingerprint); - String actualContent = Files.readString(actualFingerprint); - - assertThat(actualContent).isEqualTo(expectedContent); - } - - private static FromSbomOptions getDefaultOptions(Path sbomFile) throws IOException { - return new FromSbomOptions(sbomFile, "SHA256", null, null); - } -} diff --git a/classfile-fingerprint/src/test/resources/guava/bom.json b/classfile-fingerprint/src/test/resources/guava/bom.json deleted file mode 100644 index 3ac3705e..00000000 --- a/classfile-fingerprint/src/test/resources/guava/bom.json +++ /dev/null @@ -1,570 +0,0 @@ -{ - "bomFormat" : "CycloneDX", - "specVersion" : "1.4", - "serialNumber" : "urn:uuid:9a9f72ed-1ecd-4e72-8ffd-55add01ff290", - "version" : 1, - "metadata" : { - "timestamp" : "2023-08-18T11:12:09Z", - "tools" : [ - { - "vendor" : "OWASP Foundation", - "name" : "CycloneDX Maven plugin", - "version" : "2.7.4", - "hashes" : [ - { - "alg" : "MD5", - "content" : "1c0045824ba8b7c3459faf37fadb5ca4" - }, - { - "alg" : "SHA-1", - "content" : "c0259ad78634a65918e328d793d2ea0b8a9c2220" - }, - { - "alg" : "SHA-256", - "content" : "47bd0e0176ba679b66739820bc52880a9e667c57c8b7301de698c0ce7e271bb1" - }, - { - "alg" : "SHA-512", - "content" : "e8b72acd176d5d3e13646c2422d6fac1e47d369162cbde8796afa567d36bd182a5f8f4cbdc46185f3607a71e92c410ab0eacd87ab8c17b38e352eb3077a46ecb" - }, - { - "alg" : "SHA-384", - "content" : "8759a5908a1dbd6797ce597bba7d67a073d63129e1affd9b827482581ee85815b118fb4e950991b9d6793a5d70e8b901" - }, - { - "alg" : "SHA3-384", - "content" : "7721f8119070762eed34e1d7fbe0eb2f590130a62f9ebcf15dbb9d3321ef25ba2b0709eb6f3e922b59f7203554db555c" - }, - { - "alg" : "SHA3-256", - "content" : "3fc2ede35393130c22e8ea1985092c498f51f88c67925701906c910829aaac1e" - }, - { - "alg" : "SHA3-512", - "content" : "7f54ea340410b97d5ccf4b417928359ea30be0d71d4aaa859389f308407e9d94fa3617d395f7e81e00881da67143aa8910fdae2dd01a8fc9c9a07b8bc03fb3b1" - } - ] - } - ], - "component" : { - "group" : "org.example", - "name" : "guava", - "version" : "1.0-SNAPSHOT", - "licenses" : [ ], - "purl" : "pkg:maven/org.example/guava@1.0-SNAPSHOT?type=jar", - "type" : "library", - "bom-ref" : "pkg:maven/org.example/guava@1.0-SNAPSHOT?type=jar" - } - }, - "components" : [ - { - "group" : "com.google.guava", - "name" : "guava", - "version" : "32.1.1-jre", - "description" : "Guava is a suite of core and expanded libraries that include utility classes, Google's collections, I/O classes, and much more.", - "scope" : "optional", - "hashes" : [ - { - "alg" : "MD5", - "content" : "55870c9a31bf9ba2815f252a93ab0850" - }, - { - "alg" : "SHA-1", - "content" : "ad575652d84153075dd41ec6177ccb15251262b2" - }, - { - "alg" : "SHA-256", - "content" : "91fbba37f1c8b251cf9ea9e7d3a369eb79eb1e6a5df1d4bbf483dd0380740281" - }, - { - "alg" : "SHA-512", - "content" : "553c4c8dd7084bb558ac6b1b4a910df10d4973ea80e624d53e037c38a5aa9b001b990cad77f3e71be93a7a39a2d331cc3099ec842249e152ec0d41ec9a325d69" - }, - { - "alg" : "SHA-384", - "content" : "dad928a5179cfc8bad63855744a134e1f1f9576c873aad5be0bd66be41967f23bd335bd6d45398d7aafa13c1d0e61c48" - }, - { - "alg" : "SHA3-384", - "content" : "4ad0035ed2be1e5525f2f8d558c8a3d4abdbf78f1464e7e8061250e51eb3fecc33072e3bc74705b84080d12b7f229796" - }, - { - "alg" : "SHA3-256", - "content" : "db4b30e06f60f1b86dff8e099f2875b37e7e331123c461926aae77b0417f7a51" - }, - { - "alg" : "SHA3-512", - "content" : "44d906064e97fce4c6f231a58c702fd979c80441fe170a94cd178211cb547a51b8cbd34f133ba19d6930e064ace289bc04037eb7e39e3ed7db8cb469aae06ab1" - } - ], - "licenses" : [ - { - "license" : { - "id" : "Apache-2.0" - } - } - ], - "purl" : "pkg:maven/com.google.guava/guava@32.1.1-jre?type=jar", - "externalReferences" : [ - { - "type" : "website", - "url" : "https://github.com/google/guava" - }, - { - "type" : "build-system", - "url" : "https://github.com/google/guava/actions" - }, - { - "type" : "distribution", - "url" : "https://oss.sonatype.org/service/local/staging/deploy/maven2/" - }, - { - "type" : "issue-tracker", - "url" : "https://github.com/google/guava/issues" - }, - { - "type" : "vcs", - "url" : "https://github.com/google/guava/guava" - } - ], - "type" : "library", - "bom-ref" : "pkg:maven/com.google.guava/guava@32.1.1-jre?type=jar" - }, - { - "group" : "com.google.guava", - "name" : "failureaccess", - "version" : "1.0.1", - "description" : "Contains com.google.common.util.concurrent.internal.InternalFutureFailureAccess and InternalFutures. Most users will never need to use this artifact. Its classes is conceptually a part of Guava, but they're in this separate artifact so that Android libraries can use them without pulling in all of Guava (just as they can use ListenableFuture by depending on the listenablefuture artifact).", - "hashes" : [ - { - "alg" : "MD5", - "content" : "091883993ef5bfa91da01dcc8fc52236" - }, - { - "alg" : "SHA-1", - "content" : "1dcf1de382a0bf95a3d8b0849546c88bac1292c9" - }, - { - "alg" : "SHA-256", - "content" : "a171ee4c734dd2da837e4b16be9df4661afab72a41adaf31eb84dfdaf936ca26" - }, - { - "alg" : "SHA-512", - "content" : "f8d59b808d6ba617252305b66d5590937da9b2b843d492d06b8d0b1b1f397e39f360d5817707797b979a5bf20bf21987b35333e7a15c44ed7401fea2d2119cae" - }, - { - "alg" : "SHA-384", - "content" : "67659dbd9647ec303d7f15128dc9dba19b98fd8d74758ee3b602451e32c855e236ccaafe08edf4bbfa245f981268440f" - }, - { - "alg" : "SHA3-384", - "content" : "1460875f0331c5fa3791772a6a322a7db180261bc2adacf7271df1fbf3b088a587a755a604c039982cb593c5cfc1f101" - }, - { - "alg" : "SHA3-256", - "content" : "ea86406e75fcd93eafe3cde1b3135ba485f1bb9b75fed98894a0bf1f0aee04f0" - }, - { - "alg" : "SHA3-512", - "content" : "52ac0f487ab5dd27c9f2e54fd1d84c7a620cae9d49be4072aa2b11501787bf4391ddaa13d02eccdf19e8eea46aecbea5f6064b26777c1b836108a280652e04ac" - } - ], - "licenses" : [ - { - "license" : { - "id" : "Apache-2.0" - } - } - ], - "purl" : "pkg:maven/com.google.guava/failureaccess@1.0.1?type=jar", - "externalReferences" : [ - { - "type" : "website", - "url" : "https://github.com/google/guava/failureaccess" - }, - { - "type" : "build-system", - "url" : "https://travis-ci.org/google/guava" - }, - { - "type" : "distribution", - "url" : "https://oss.sonatype.org/service/local/staging/deploy/maven2/" - }, - { - "type" : "issue-tracker", - "url" : "https://github.com/google/guava/issues" - }, - { - "type" : "vcs", - "url" : "https://github.com/google/guava/failureaccess" - } - ], - "type" : "library", - "bom-ref" : "pkg:maven/com.google.guava/failureaccess@1.0.1?type=jar" - }, - { - "group" : "com.google.guava", - "name" : "listenablefuture", - "version" : "9999.0-empty-to-avoid-conflict-with-guava", - "description" : "An empty artifact that Guava depends on to signal that it is providing ListenableFuture -- but is also available in a second \"version\" that contains com.google.common.util.concurrent.ListenableFuture class, without any other Guava classes. The idea is: - If users want only ListenableFuture, they depend on listenablefuture-1.0. - If users want all of Guava, they depend on guava, which, as of Guava 27.0, depends on listenablefuture-9999.0-empty-to-avoid-conflict-with-guava. The 9999.0-... version number is enough for some build systems (notably, Gradle) to select that empty artifact over the \"real\" listenablefuture-1.0 -- avoiding a conflict with the copy of ListenableFuture in guava itself. If users are using an older version of Guava or a build system other than Gradle, they may see class conflicts. If so, they can solve them by manually excluding the listenablefuture artifact or manually forcing their build systems to use 9999.0-....", - "hashes" : [ - { - "alg" : "MD5", - "content" : "d094c22570d65e132c19cea5d352e381" - }, - { - "alg" : "SHA-1", - "content" : "b421526c5f297295adef1c886e5246c39d4ac629" - }, - { - "alg" : "SHA-256", - "content" : "b372a037d4230aa57fbeffdef30fd6123f9c0c2db85d0aced00c91b974f33f99" - }, - { - "alg" : "SHA-512", - "content" : "c5987a979174cbacae2e78b319f080420cc71bcdbcf7893745731eeb93c23ed13bff8d4599441f373f3a246023d33df03e882de3015ee932a74a774afdd0782f" - }, - { - "alg" : "SHA-384", - "content" : "caff9b74079f95832ca7f6029346b34b606051cc8c5a4389fac263511d277ada0c55f28b0d43011055b268c6eb7184d5" - }, - { - "alg" : "SHA3-384", - "content" : "e939f08df0545847ea0d3e4b04a114b08499ad069ba8ec9461d1779f87a56e0c37273630a0f4c14e78c348d3ac7eb97f" - }, - { - "alg" : "SHA3-256", - "content" : "1f0a8b1177773b3a8ace839df5eed63cbf56b24a38714898a6e4ed065c42559f" - }, - { - "alg" : "SHA3-512", - "content" : "6b495ecc2a18b17365cb08d124a0da47f04bcdde81927b5245edf3edd8e498c3c3fb92ce6a4127f660bac851bb1d3e4510e5c20d03be47ce99dc296d360db285" - } - ], - "licenses" : [ - { - "license" : { - "id" : "Apache-2.0" - } - } - ], - "purl" : "pkg:maven/com.google.guava/listenablefuture@9999.0-empty-to-avoid-conflict-with-guava?type=jar", - "externalReferences" : [ - { - "type" : "website", - "url" : "https://github.com/google/guava/listenablefuture" - }, - { - "type" : "build-system", - "url" : "https://travis-ci.org/google/guava" - }, - { - "type" : "distribution", - "url" : "https://oss.sonatype.org/service/local/staging/deploy/maven2/" - }, - { - "type" : "issue-tracker", - "url" : "https://github.com/google/guava/issues" - }, - { - "type" : "vcs", - "url" : "https://github.com/google/guava/listenablefuture" - } - ], - "type" : "library", - "bom-ref" : "pkg:maven/com.google.guava/listenablefuture@9999.0-empty-to-avoid-conflict-with-guava?type=jar" - }, - { - 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-{"com/google/common/graph/IncidentEdgeSet":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"2e5c87fd679943df73ba974e85f9f7b1f0e0d3bdcbf3b843fded07022672f1aa","algorithm":"SHA256"},"groupId":"com.google.guava","artifactId":"guava","version":"32.1.1-jre"}]} -{"com/google/common/base/Throwables$1":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"eb465576962f45e244064ecc6a02efa897d3541cc1eac020bd6c776ce3a23b9b","algorithm":"SHA256"},"groupId":"com.google.guava","artifactId":"guava","version":"32.1.1-jre"}]} -{"org/checkerframework/checker/fenum/qual/PolyFenum":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"09a552b16a178ae737450942be854f890372e8a4a5096d38aa9780bb37ce1d7b","algorithm":"SHA256"},"groupId":"org.checkerframework","artifactId":"checker-qual","version":"3.33.0"}]} \ No newline at end of file diff --git a/experiments/sorald/README.md b/experiments/sorald/README.md deleted file mode 100644 index 38e51004..00000000 --- a/experiments/sorald/README.md +++ /dev/null @@ -1,34 +0,0 @@ -Since I was aware of a jar that was downloaded at runtime for `sorald`, I -passed it while generating the fingerprints. - -```shell -mvn clean \ - install \ - io.github.algomaster99:classfile-fingerprint:0.8.1-SNAPSHOT:generate \ - -DexternalJars=$(realpath external-jars.json) \ - -DskipUnitTests \ - -DskipIntegrationTests -``` - -Simply run the following command: - -```bash - java -javaagent:watchdog-agent-0.8.1-SNAPSHOT.jar=fingerprints=classfile.sha256.jsonl,skipShutdown=true -jar sorald-0.8.5-jar-with-dependencies.jar mine --source App.java -``` - -### Reproduction details - -1. `maven`: Apache Maven 3.9.1 (2e178502fcdbffc201671fb2537d0cb4b4cc58f8) -2. `java`: 17.0.5 oracle -3. `OS`: Ubuntu 22.04 -4. `classfile-fingerprint`: `f38a62df1bbee4cb232c4fe4ccdf220e8ec50a60` -5. `watchdog-agent`: `f38a62df1bbee4cb232c4fe4ccdf220e8ec50a60` -6. `sorald/sorald`: `0.8.5` - -## Results - -After including the external jar while generating the fingerprints, I get the following errors when running the workloads: - -```text -[NOT WHITELISTED]: org/sonarsource/sonarlint/shaded/org/springframework/core/$Proxy30 -``` diff --git a/experiments/sorald/classfile.sha256.jsonl b/experiments/sorald/classfile.sha256.jsonl deleted file mode 100644 index 8e676916..00000000 --- a/experiments/sorald/classfile.sha256.jsonl +++ /dev/null @@ -1,22128 +0,0 @@ -{"org/eclipse/jgit/diff/Subsequence":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"cd8fc15eccb32569d7fdbe012c7ae8144b00ab1b7370f888692d57698440bbad","algorithm":"SHA256"},"groupId":"org.eclipse.jgit","artifactId":"org.eclipse.jgit","version":"6.5.0.202303070854-r"}]} -{"org/apache/jasper/util/FastRemovalDequeue$Entry":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"6a1e65f1d598bb5cfa737abb26bb01af4a2011525a579affd22da1d68f1d195e","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} 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-{"com/google/protobuf/SmallSortedMap$EntrySet":[{"classFileAttributes":{"classfileVersion":"51.0","hash":"ce30f3a52692a8791bfbd2cfbbe323e55aea94edb8e7e8ba05cf808fe38bf86d","algorithm":"SHA256"},"groupId":"org.sonarsource.sonarlint.core","artifactId":"sonarlint-core","version":"8.15.0.65216"}]} -{"org/sonarsource/sonarlint/shaded/org/springframework/scripting/support/package-info":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"77d9741d57a8604bf861dd409715a30a06edd047f8a86acda0a3fd747f5a1895","algorithm":"SHA256"},"groupId":"org.sonarsource.sonarlint.core","artifactId":"sonarlint-core","version":"8.15.0.65216"}]} -{"org/eclipse/text/edits/ISourceModifier":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"773af2e5df79ae6a729b4d8029f4e430f286118eb0c6905dfaba42749b16fd2a","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} -{"org/eclipse/jdt/core/IClasspathContainer":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"5674bd7ad04c8173a02c8b9e652e3540f7570dcb7b444fd09cacf72f694ad33b","algorithm":"SHA256"},"groupId":"org.eclipse.jdt","artifactId":"org.eclipse.jdt.core","version":"3.32.0"},{"classFileAttributes":{"classfileVersion":"55.0","hash":"57f34e542c5c240a497bb95aca28d63eefdac32337ec1e1c1252bda80c58bdf3","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} -{"org/eclipse/jdt/core/ITypeParameter":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"e3780e963634c8809f8ee92c1d95cfcc62afc5d568f430b57b2e5bf5b5b02809","algorithm":"SHA256"},"groupId":"org.eclipse.jdt","artifactId":"org.eclipse.jdt.core","version":"3.32.0"},{"classFileAttributes":{"classfileVersion":"55.0","hash":"e3780e963634c8809f8ee92c1d95cfcc62afc5d568f430b57b2e5bf5b5b02809","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} -{"jetbrains/exodus/entitystore/iterate/binop/MinusIterable$UnsortedIterator$exceptSet$2":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"91fa7545572b74167ac490b3121adad379af714fd92fcd72d73e7e710b680c03","algorithm":"SHA256"},"groupId":"org.sonarsource.sonarlint.core","artifactId":"sonarlint-core","version":"8.15.0.65216"}]} -{"org/eclipse/core/internal/runtime/PlatformURLPluginConnection":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"a96fef95f4e288fa53463be0c729b7d60b7aebe9275ed29cab5a743ec366c2d4","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} -{"org/apache/commons/compress/archivers/zip/StreamCompressor":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"6eb7e6e919e5b38d5b8bfe8a9b4709d82c71b1382c2f9ab2874591b6af77ea89","algorithm":"SHA256"},"groupId":"org.apache.commons","artifactId":"commons-compress","version":"1.22"}]} -{"org/apache/commons/compress/harmony/pack200/NewAttributeBands$Call":[{"classFileAttributes":{"classfileVersion":"52.0","hash":"be63ad7bd71e398ac6a3e013b22213788e28af42e960538c0ba04449386d6445","algorithm":"SHA256"},"groupId":"org.apache.commons","artifactId":"commons-compress","version":"1.22"}]} -{"spoon/reflect/visitor/chain/QueryFailurePolicy":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"eb49e93a201f851ca7eaeb04f1ba0bdf793185941041f4e42b72d531ca291583","algorithm":"SHA256"},"groupId":"fr.inria.gforge.spoon","artifactId":"spoon-core","version":"10.3.0"}]} -{"org/sonar/java/se/xproc/HappyPathYield":[{"classFileAttributes":{"classfileVersion":"55.0","hash":"145c2974fc12a7bc5cc14c6d61b8edbbe2e10f5beb60836bb4d6c4a1ad2867dd","algorithm":"SHA256"},"path":"/home/aman/spoonlabs/sorald/sonar-java-plugin-7.16.0.30901.jar"}]} \ No newline at end of file diff --git a/experiments/sorald/watchdog-agent-0.8.1-SNAPSHOT.jar b/experiments/sorald/watchdog-agent-0.8.1-SNAPSHOT.jar deleted file mode 100644 index 3fc5fd95..00000000 Binary files a/experiments/sorald/watchdog-agent-0.8.1-SNAPSHOT.jar and /dev/null differ diff --git a/jreleaser.json b/jreleaser.json index 79a66a6c..15144950 100644 --- a/jreleaser.json +++ b/jreleaser.json @@ -35,15 +35,6 @@ }, "distributions": { - "classfile-fingerprint": { - "type": "SINGLE_JAR", - "stereotype": "CLI", - "artifacts": [ - { - "path": "classfile-fingerprint/target/{{distributionName}}-{{projectVersion}}.jar" - } - ] - }, "watchdog-agent": { "type": "SINGLE_JAR", "stereotype": "CLI", diff --git a/watchdog-agent/src/main/java/io/github/algomaster99/Options.java b/watchdog-agent/src/main/java/io/github/algomaster99/Options.java index 36abe60c..5ed0023f 100644 --- a/watchdog-agent/src/main/java/io/github/algomaster99/Options.java +++ b/watchdog-agent/src/main/java/io/github/algomaster99/Options.java @@ -2,6 +2,7 @@ import static io.github.algomaster99.terminator.commons.fingerprint.ParsingHelper.deserializeFingerprints; import static io.github.algomaster99.terminator.commons.jar.JarScanner.goInsideJarAndUpdateFingerprints; +import static io.github.algomaster99.terminator.commons.jar.JarScanner.processExternalJars; import io.github.algomaster99.terminator.commons.cyclonedx.Bom14Schema; import io.github.algomaster99.terminator.commons.cyclonedx.Component; @@ -12,16 +13,30 @@ import java.io.IOException; import java.nio.file.Files; import java.nio.file.Path; +import java.util.HashMap; import java.util.List; import java.util.Map; +import org.slf4j.Logger; +import org.slf4j.LoggerFactory; public class Options { - private Map> fingerprints; + + private static final Logger LOGGER = LoggerFactory.getLogger(Options.class); + private Map> fingerprints = new HashMap<>(); private boolean skipShutdown = false; + private boolean isSbomPassed = false; + + private String algorithm = "SHA-256"; + + private Path output = Path.of(String.format("classfile.%s.json", algorithm.toLowerCase())); + + private Path externalJars; + public Options(String agentArgs) { String[] args = agentArgs.split(","); + Path sbomPath = null; for (String arg : args) { String[] split = arg.split("="); if (split.length != 2) { @@ -39,41 +54,89 @@ public Options(String agentArgs) { break; case "sbom": // If an SBOM is passed included the root component in the fingerprints - Path sbomPath = Path.of(value); - try { - Bom14Schema sbom = CycloneDX.getPOJO(Files.readString(sbomPath)); - Component rootComponent = sbom.getMetadata().getComponent(); - File jarFile = JarDownloader.getMavenJarFile( - rootComponent.getGroup(), rootComponent.getName(), rootComponent.getVersion()); - goInsideJarAndUpdateFingerprints( - jarFile, - fingerprints, - // TODO: Make this configurable - "SHA256", - rootComponent.getGroup(), - rootComponent.getName(), - rootComponent.getVersion()); - } catch (InterruptedException e) { - System.err.println("Downloading was interrupted: " + e.getMessage()); - System.exit(1); - } catch (IOException e) { - throw new IllegalArgumentException("Failed to read sbom file: " + value); - } + sbomPath = Path.of(value); + isSbomPassed = true; + break; + case "algorithm": + algorithm = value; + break; + case "output": + output = Path.of(value); + break; + case "externalJars": + externalJars = Path.of(value); break; default: throw new IllegalArgumentException("Unknown argument: " + key); } } + if (isSbomPassed) { + LOGGER.info("Generating fingerprint from SBOM and external jars"); + try { + Bom14Schema sbom = CycloneDX.getPOJO(Files.readString(sbomPath)); + LOGGER.debug("Processing root component: " + sbom.getMetadata().getComponent()); + processRootComponent(sbom); + LOGGER.debug("Processing all components"); + processAllComponents(sbom); + if (externalJars != null) { + LOGGER.debug("Processing external jars"); + processExternalJars(externalJars.toFile(), fingerprints, algorithm); + } + } catch (InterruptedException e) { + System.err.println("Downloading jars was interrupted: " + e.getMessage()); + System.exit(1); + } catch (IOException e) { + throw new IllegalArgumentException("Failed to read sbom file: " + sbomPath); + } + } else { + LOGGER.info("Taking fingerprint from file: " + fingerprints); + } } public Map> getFingerprints() { - if (fingerprints == null) { - throw new IllegalStateException("Fingerprints not set"); - } return fingerprints; } public boolean shouldSkipShutdown() { return skipShutdown; } + + public boolean isSbomPassed() { + return isSbomPassed; + } + + public Path getOutput() { + return output; + } + + private void processRootComponent(Bom14Schema sbom) throws IOException, InterruptedException { + Component rootComponent = sbom.getMetadata().getComponent(); + File jarFile = JarDownloader.getMavenJarFile( + rootComponent.getGroup(), rootComponent.getName(), rootComponent.getVersion()); + goInsideJarAndUpdateFingerprints( + jarFile, + fingerprints, + algorithm, + rootComponent.getGroup(), + rootComponent.getName(), + rootComponent.getVersion()); + } + + private void processAllComponents(Bom14Schema sbom) { + for (Component component : sbom.getComponents()) { + try { + File jarFile = JarDownloader.getMavenJarFile( + component.getGroup(), component.getName(), component.getVersion()); + goInsideJarAndUpdateFingerprints( + jarFile, + fingerprints, + algorithm, + component.getGroup(), + component.getName(), + component.getVersion()); + } catch (IOException | InterruptedException e) { + throw new RuntimeException(e); + } + } + } } diff --git a/watchdog-agent/src/test/java/AgentTest.java b/watchdog-agent/src/test/java/AgentTest.java index 152edd7c..59ac3051 100644 --- a/watchdog-agent/src/test/java/AgentTest.java +++ b/watchdog-agent/src/test/java/AgentTest.java @@ -65,6 +65,36 @@ void shouldDisallowLoadingCustomJDKClass() throws MavenInvocationException, IOEx assertThat(exitCode).isEqualTo(1); } + @Test + void sorald_0_8_5_shouldExitWith_1() throws IOException, InterruptedException { + Path project = Paths.get("src/test/resources/sorald-0.8.5"); + + Path sbom = project.resolve("bom.json"); + Path externalJars = project.resolve("external-jars.json").toAbsolutePath(); + Path soraldExecutable = project.resolve("sorald-0.8.5-jar-with-dependencies.jar"); + Path fileWithWarning = project.resolve("App.java").toAbsolutePath(); + + String agentArgs = "sbom=" + sbom + ",externalJars=" + externalJars; + String[] cmd = { + "java", + "-javaagent:" + getAgentPath(agentArgs), + "-jar", + soraldExecutable.toString(), + "mine", + "--source", + fileWithWarning.toString() + }; + ProcessBuilder pb = new ProcessBuilder(cmd); + pb.redirectInput(ProcessBuilder.Redirect.INHERIT); + pb.redirectOutput(ProcessBuilder.Redirect.INHERIT); + pb.redirectError(ProcessBuilder.Redirect.INHERIT); + + Process p = pb.start(); + int exitCode = p.waitFor(); + + assertThat(exitCode).isEqualTo(1); + } + private static void deleteContentsOfFile(String file) throws InterruptedException, IOException { String[] deleteFile = {"rm", "-f", file}; Runtime.getRuntime().exec(deleteFile).waitFor(); diff --git a/experiments/sorald/App.java b/watchdog-agent/src/test/resources/sorald-0.8.5/App.java similarity index 100% rename from experiments/sorald/App.java rename to watchdog-agent/src/test/resources/sorald-0.8.5/App.java diff --git a/watchdog-agent/src/test/resources/sorald-0.8.5/README.md b/watchdog-agent/src/test/resources/sorald-0.8.5/README.md new file mode 100644 index 00000000..36495af6 --- /dev/null +++ b/watchdog-agent/src/test/resources/sorald-0.8.5/README.md @@ -0,0 +1,8 @@ +## Results + +After including the external jar while generating the fingerprints, I get the following errors when running the workloads: + +```text +[NOT WHITELISTED]: org/sonarsource/sonarlint/shaded/org/springframework/core/$Proxy40 +``` +> This is a false positive because it is a runtime generated class. diff --git a/watchdog-agent/src/test/resources/sorald-0.8.5/bom.json b/watchdog-agent/src/test/resources/sorald-0.8.5/bom.json new file mode 100644 index 00000000..7be01dff --- /dev/null +++ b/watchdog-agent/src/test/resources/sorald-0.8.5/bom.json @@ -0,0 +1,81 @@ +{ + "bomFormat" : "CycloneDX", + "specVersion" : "1.4", + "serialNumber" : "urn:uuid:d57349ee-cf88-4e8a-bb47-886015c4caf1", + "version" : 1, + "metadata" : { + "timestamp" : "2023-08-22T12:48:03Z", + "tools" : [ + { + "vendor" : "OWASP Foundation", + "name" : "CycloneDX Maven plugin", + "version" : "2.7.4", + "hashes" : [ + { + "alg" : "MD5", + "content" : "1c0045824ba8b7c3459faf37fadb5ca4" + }, + { + "alg" : "SHA-1", + "content" : "c0259ad78634a65918e328d793d2ea0b8a9c2220" + }, + { + "alg" : "SHA-256", + "content" : "47bd0e0176ba679b66739820bc52880a9e667c57c8b7301de698c0ce7e271bb1" + }, + { + "alg" : "SHA-512", + "content" : "e8b72acd176d5d3e13646c2422d6fac1e47d369162cbde8796afa567d36bd182a5f8f4cbdc46185f3607a71e92c410ab0eacd87ab8c17b38e352eb3077a46ecb" + }, + { + "alg" : "SHA-384", + "content" : "8759a5908a1dbd6797ce597bba7d67a073d63129e1affd9b827482581ee85815b118fb4e950991b9d6793a5d70e8b901" + }, + { + "alg" : "SHA3-384", + "content" : "7721f8119070762eed34e1d7fbe0eb2f590130a62f9ebcf15dbb9d3321ef25ba2b0709eb6f3e922b59f7203554db555c" + }, + { + "alg" : "SHA3-256", + "content" : "3fc2ede35393130c22e8ea1985092c498f51f88c67925701906c910829aaac1e" + }, + { + "alg" : "SHA3-512", + "content" : "7f54ea340410b97d5ccf4b417928359ea30be0d71d4aaa859389f308407e9d94fa3617d395f7e81e00881da67143aa8910fdae2dd01a8fc9c9a07b8bc03fb3b1" + } + ] + } + ], + "component" : { + "group" : "se.kth.castor", + "name" : "sorald", + "version" : "0.8.5", + "description" : "An automatic repair system for static code analysis warnings from Sonar Java.", + "licenses" : [ + { + "license" : { + "id" : "MIT", + "url" : "https://opensource.org/licenses/MIT" + } + } + ], + "purl" : "pkg:maven/se.kth.castor/sorald@0.8.5?type=maven-plugin", + "externalReferences" : [ + { + "type" : "website", + "url" : "https://github.com/SpoonLabs/sorald" + }, + { + "type" : "distribution", + "url" : "https://oss.sonatype.org/service/local/staging/deploy/maven2/" + }, + { + "type" : "vcs", + "url" : "https://github.com/SpoonLabs/sorald" + } + ], + "type" : "library", + "bom-ref" : "pkg:maven/se.kth.castor/sorald@0.8.5?type=maven-plugin" + } + } +} \ No newline at end of file diff --git a/experiments/sorald/external-jars.json b/watchdog-agent/src/test/resources/sorald-0.8.5/external-jars.json similarity index 100% rename from experiments/sorald/external-jars.json rename to watchdog-agent/src/test/resources/sorald-0.8.5/external-jars.json diff --git a/experiments/sorald/sonar-java-plugin-7.16.0.30901.jar b/watchdog-agent/src/test/resources/sorald-0.8.5/sonar-java-plugin-7.16.0.30901.jar similarity index 100% rename from experiments/sorald/sonar-java-plugin-7.16.0.30901.jar rename to watchdog-agent/src/test/resources/sorald-0.8.5/sonar-java-plugin-7.16.0.30901.jar diff --git a/experiments/sorald/sorald-0.8.5-jar-with-dependencies.jar b/watchdog-agent/src/test/resources/sorald-0.8.5/sorald-0.8.5-jar-with-dependencies.jar similarity index 96% rename from experiments/sorald/sorald-0.8.5-jar-with-dependencies.jar rename to watchdog-agent/src/test/resources/sorald-0.8.5/sorald-0.8.5-jar-with-dependencies.jar index b8c082a0..5a244674 100644 Binary files a/experiments/sorald/sorald-0.8.5-jar-with-dependencies.jar and b/watchdog-agent/src/test/resources/sorald-0.8.5/sorald-0.8.5-jar-with-dependencies.jar differ