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fixing a typo
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bioinformatics/QpcrAnalysis/amp_analysis.jl

Lines changed: 13 additions & 13 deletions
Original file line numberDiff line numberDiff line change
@@ -253,26 +253,26 @@ function set_report_cq!(
253253
o.cq[well_i, channel_i] < min_reliable_cyc_ || postbl_status == :Error ||
254254
b_ > 0)
255255

256-
why_cq_failed = "Cq for W:$well_i, C:$channel_i failed due to: "
257-
why_cq_failed *= max_bsf < i.max_bsf_lb ? "max_bsf($max_bsf) < i.max_bsf_lb($(i.max_bsf_lb)) |" : ""
258-
why_cq_failed *= scaled_max_bsf < i.scaled_max_bsf_lb ? "scaled_max_bsf($scaled_max_bsf) < i.scaled_max_bsf_lb($(i.scaled_max_bsf_lb)) |" : ""
259-
why_cq_failed *= max_dr2 < max_dr2_lb ? "max_dr2($max_dr2) < max_dr2_lb($max_dr2_lb) |" : ""
260-
why_cq_failed *= max_dr1 < max_dr1_lb ? "max_dr1 < max_dr1_lb : " * "$max_dr1 < $max_dr1_lb |" : ""
261-
why_cq_failed *= scaled_max_dr2 < i.scaled_max_dr2_lb ? "scaled_max_dr2($scaled_max_dr2) < i.scaled_max_dr2_lb($(i.scaled_max_dr2_lb)) |" : ""
262-
why_cq_failed *= scaled_max_dr1 < i.scaled_max_dr1_lb ? "scaled_max_dr1($scaled_max_dr1) < i.scaled_max_dr1_lb($(i.scaled_max_dr1_lb)) |" : ""
263-
why_cq_failed *= o.cq[well_i, channel_i] > i.num_cycles ? "o.cq[well_i, channel_i]($(o.cq[well_i, channel_i])) > i.num_cycles($(i.num_cycles)) |" : ""
264-
why_cq_failed *= o.cq[well_i, channel_i] < min_reliable_cyc_ ? "o.cq[well_i, channel_i]($(o.cq[well_i, channel_i])) < min_reliable_cyc_($(min_reliable_cyc_)) |" : ""
265-
why_cq_failed *= postbl_status == :Error ? "postbl_status == :Error |" : ""
266-
why_cq_failed *= b_ > 0 ? "b_($b_) > 0 |" : ""
267-
debug(logger, why_cq_failed)
256+
why_cq_failed = "Cq for W:$well_i, C:$channel_i failed due to: "
257+
why_cq_failed *= max_bsf < i.max_bsf_lb ? "max_bsf($max_bsf) < i.max_bsf_lb($(i.max_bsf_lb)) |" : ""
258+
why_cq_failed *= scaled_max_bsf < i.scaled_max_bsf_lb ? "scaled_max_bsf($scaled_max_bsf) < i.scaled_max_bsf_lb($(i.scaled_max_bsf_lb)) |" : ""
259+
why_cq_failed *= max_dr2 < max_dr2_lb ? "max_dr2($max_dr2) < max_dr2_lb($max_dr2_lb) |" : ""
260+
why_cq_failed *= max_dr1 < max_dr1_lb ? "max_dr1 < max_dr1_lb : " * "$max_dr1 < $max_dr1_lb |" : ""
261+
why_cq_failed *= scaled_max_dr2 < i.scaled_max_dr2_lb ? "scaled_max_dr2($scaled_max_dr2) < i.scaled_max_dr2_lb($(i.scaled_max_dr2_lb)) |" : ""
262+
why_cq_failed *= scaled_max_dr1 < i.scaled_max_dr1_lb ? "scaled_max_dr1($scaled_max_dr1) < i.scaled_max_dr1_lb($(i.scaled_max_dr1_lb)) |" : ""
263+
why_cq_failed *= o.cq[well_i, channel_i] > i.num_cycles ? "o.cq[well_i, channel_i]($(o.cq[well_i, channel_i])) > i.num_cycles($(i.num_cycles)) |" : ""
264+
why_cq_failed *= o.cq[well_i, channel_i] < min_reliable_cyc_ ? "o.cq[well_i, channel_i]($(o.cq[well_i, channel_i])) < min_reliable_cyc_($(min_reliable_cyc_)) |" : ""
265+
why_cq_failed *= postbl_status == :Error ? "postbl_status == :Error |" : ""
266+
why_cq_failed *= b_ > 0 ? "b_($b_) > 0 |" : ""
267+
debug(logger, why_cq_failed)
268268

269269
o.blsub_fluos[:,well_i, channel_i]=o.blsub_fluos_flb[:,well_i, channel_i]
270270
o.dr1_pred[:,well_i, channel_i]=o.dr1_pred1[:,well_i, channel_i]
271271
o.dr2_pred[:,well_i, channel_i]=o.dr2_pred1[:,well_i, channel_i]
272272

273273
else
274274
temp_cq[well_i, channel_i] = o.cq[well_i, channel_i]
275-
debug(logger, "Cq for W:$well_i, C:$channel_i >> $(o.cq[well_i, channel_i])")
275+
debug(logger, "Cq for W:$well_i, C:$channel_i >> $(o.cq[well_i, channel_i])")
276276
end
277277
end
278278
o.cq=convert(typeof(o.cq), temp_cq)

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