CITATION.cff

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# CITATION file created with {cffr} R package, v0.5.0
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CPTrackRApp" in publications use:'
type: software
license: MIT
title: 'CPTrackRApp: CPTrackR App'
version: 0.0.0.9003
abstract: An app to explore CellProfiler tracking output.
authors:
- family-names: Burger
  given-names: Gerhard
  email: burger.ga@gmail.com
  orcid: https://orcid.org/0000-0003-1062-5576
repository-code: https://github.com/burgerga/CPTrackRApp
url: https://github.com/burgerga/CPTrackRApp
contact:
- family-names: Burger
  given-names: Gerhard
  email: burger.ga@gmail.com
  orcid: https://orcid.org/0000-0003-1062-5576
references:
- type: software
  title: config
  abstract: 'config: Manage Environment Specific Configuration Values'
  notes: Imports
  url: https://rstudio.github.io/config/
  repository: https://CRAN.R-project.org/package=config
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@rstudio.com
  year: '2023'
- type: software
  title: golem
  abstract: 'golem: A Framework for Robust Shiny Applications'
  notes: Imports
  url: https://github.com/ThinkR-open/golem
  repository: https://CRAN.R-project.org/package=golem
  authors:
  - family-names: Fay
    given-names: Colin
    email: contact@colinfay.me
    orcid: https://orcid.org/0000-0001-7343-1846
  - family-names: Guyader
    given-names: Vincent
    email: vincent@thinkr.fr
    orcid: https://orcid.org/0000-0003-0671-9270
  - family-names: Rochette
    given-names: Sébastien
    email: sebastien@thinkr.fr
    orcid: https://orcid.org/0000-0002-1565-9313
  - family-names: Girard
    given-names: Cervan
    email: cervan@thinkr.fr
    orcid: https://orcid.org/0000-0002-4816-4624
  year: '2023'
- type: software
  title: shiny
  abstract: 'shiny: Web Application Framework for R'
  notes: Imports
  url: https://shiny.posit.co/
  repository: https://CRAN.R-project.org/package=shiny
  authors:
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Sievert
    given-names: Carson
    email: carson@posit.co
    orcid: https://orcid.org/0000-0002-4958-2844
  - family-names: Schloerke
    given-names: Barret
    email: barret@posit.co
    orcid: https://orcid.org/0000-0001-9986-114X
  - family-names: Xie
    given-names: Yihui
    email: yihui@posit.co
  - family-names: Allen
    given-names: Jeff
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Dipert
    given-names: Alan
  - family-names: Borges
    given-names: Barbara
  year: '2023'
- type: software
  title: processx
  abstract: 'processx: Execute and Control System Processes'
  notes: Imports
  url: https://processx.r-lib.org
  repository: https://CRAN.R-project.org/package=processx
  authors:
  - family-names: Csárdi
    given-names: Gábor
    email: csardi.gabor@gmail.com
    orcid: https://orcid.org/0000-0001-7098-9676
  - family-names: Chang
    given-names: Winston
  year: '2023'
- type: software
  title: attempt
  abstract: 'attempt: Tools for Defensive Programming'
  notes: Imports
  url: https://github.com/ColinFay/attempt
  repository: https://CRAN.R-project.org/package=attempt
  authors:
  - family-names: Fay
    given-names: Colin
    email: contact@colinfay.me
    orcid: https://orcid.org/0000-0001-7343-1846
  year: '2023'
- type: software
  title: DT
  abstract: 'DT: A Wrapper of the JavaScript Library ''DataTables'''
  notes: Imports
  url: https://github.com/rstudio/DT
  repository: https://CRAN.R-project.org/package=DT
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
  - family-names: Cheng
    given-names: Joe
  - family-names: Tan
    given-names: Xianying
  year: '2023'
- type: software
  title: glue
  abstract: 'glue: Interpreted String Literals'
  notes: Imports
  url: https://glue.tidyverse.org/
  repository: https://CRAN.R-project.org/package=glue
  authors:
  - family-names: Hester
    given-names: Jim
    orcid: https://orcid.org/0000-0002-2739-7082
  - family-names: Bryan
    given-names: Jennifer
    email: jenny@rstudio.com
    orcid: https://orcid.org/0000-0002-6983-2759
  year: '2023'
- type: software
  title: htmltools
  abstract: 'htmltools: Tools for HTML'
  notes: Imports
  url: https://rstudio.github.io/htmltools/
  repository: https://CRAN.R-project.org/package=htmltools
  authors:
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Sievert
    given-names: Carson
    email: carson@posit.co
    orcid: https://orcid.org/0000-0002-4958-2844
  - family-names: Schloerke
    given-names: Barret
    email: barret@posit.co
    orcid: https://orcid.org/0000-0001-9986-114X
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Xie
    given-names: Yihui
    email: yihui@posit.co
  - family-names: Allen
    given-names: Jeff
  year: '2023'
- type: software
  title: CPTrackR
  abstract: 'CPTrackR: Create unique track identifiers for CellProfiler tracking output'
  notes: Imports
  authors:
  - family-names: Burger
    given-names: Gerhard
    email: burger.ga@gmail.com
    orcid: https://orcid.org/0000-0003-1062-5576
  - family-names: Heldring
    given-names: Muriel
    email: murielheldring@gmail.com
    orcid: https://orcid.org/0000-0002-3565-7227
  - family-names: Wink
    given-names: Steven
    email: hardervidertsie@gmail.com
    orcid: https://orcid.org/0000-0003-1189-7231
  version: '>= 0.2.2'
  year: '2023'
- type: software
  title: celltrackR
  abstract: 'celltrackR: Motion Trajectory Analysis'
  notes: Imports
  url: http://www.motilitylab.net
  repository: https://CRAN.R-project.org/package=celltrackR
  authors:
  - family-names: Textor
    given-names: Johannes
    email: johannes.textor@gmx.de
  - family-names: Dannenberg
    given-names: Katharina
  - family-names: Berry
    given-names: Jeffrey
  - family-names: Burger
    given-names: Gerhard
  - family-names: Liu
    given-names: Annie
  - family-names: Wortel
    given-names: Inge
    email: ingewortel@gmail.com
  year: '2023'
- type: software
  title: DBI
  abstract: 'DBI: R Database Interface'
  notes: Imports
  url: https://dbi.r-dbi.org
  repository: https://CRAN.R-project.org/package=DBI
  authors:
  - name: R Special Interest Group on Databases (R-SIG-DB)
  - family-names: Wickham
    given-names: Hadley
  - family-names: Müller
    given-names: Kirill
    email: krlmlr+r@mailbox.org
    orcid: https://orcid.org/0000-0002-1416-3412
  year: '2023'
- type: software
  title: RSQLite
  abstract: 'RSQLite: SQLite Interface for R'
  notes: Imports
  url: https://rsqlite.r-dbi.org
  repository: https://CRAN.R-project.org/package=RSQLite
  authors:
  - family-names: Müller
    given-names: Kirill
    email: kirill@cynkra.com
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Wickham
    given-names: Hadley
  - family-names: James
    given-names: David A.
  - family-names: Falcon
    given-names: Seth
  year: '2023'
- type: software
  title: pool
  abstract: 'pool: Object Pooling'
  notes: Imports
  url: http://rstudio.github.io/pool/
  repository: https://CRAN.R-project.org/package=pool
  authors:
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Borges
    given-names: Barbara
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2023'
- type: software
  title: pkgload
  abstract: 'pkgload: Simulate Package Installation and Attach'
  notes: Imports
  url: https://pkgload.r-lib.org
  repository: https://CRAN.R-project.org/package=pkgload
  authors:
  - family-names: Wickham
    given-names: Hadley
  - family-names: Chang
    given-names: Winston
  - family-names: Hester
    given-names: Jim
  - family-names: Henry
    given-names: Lionel
    email: lionel@posit.co
  year: '2023'
- type: software
  title: magrittr
  abstract: 'magrittr: A Forward-Pipe Operator for R'
  notes: Imports
  url: https://magrittr.tidyverse.org
  repository: https://CRAN.R-project.org/package=magrittr
  authors:
  - family-names: Bache
    given-names: Stefan Milton
    email: stefan@stefanbache.dk
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  year: '2023'
- type: software
  title: dplyr
  abstract: 'dplyr: A Grammar of Data Manipulation'
  notes: Imports
  url: https://dplyr.tidyverse.org
  repository: https://CRAN.R-project.org/package=dplyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: François
    given-names: Romain
    orcid: https://orcid.org/0000-0002-2444-4226
  - family-names: Henry
    given-names: Lionel
  - family-names: Müller
    given-names: Kirill
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Vaughan
    given-names: Davis
    email: davis@posit.co
    orcid: https://orcid.org/0000-0003-4777-038X
  year: '2023'
- type: software
  title: stringr
  abstract: 'stringr: Simple, Consistent Wrappers for Common String Operations'
  notes: Imports
  url: https://stringr.tidyverse.org
  repository: https://CRAN.R-project.org/package=stringr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2023'
- type: software
  title: stringi
  abstract: 'stringi: Fast and Portable Character String Processing Facilities'
  notes: Imports
  url: https://stringi.gagolewski.com/
  repository: https://CRAN.R-project.org/package=stringi
  authors:
  - family-names: Gagolewski
    given-names: Marek
  - family-names: Tartanus
    given-names: Bartek
  - family-names: Unicode
    given-names: others;
  - name: Inc.
  - name: others
  year: '2023'
- type: software
  title: purrr
  abstract: 'purrr: Functional Programming Tools'
  notes: Imports
  url: https://purrr.tidyverse.org/
  repository: https://CRAN.R-project.org/package=purrr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Henry
    given-names: Lionel
    email: lionel@rstudio.com
  year: '2023'
- type: software
  title: tibble
  abstract: 'tibble: Simple Data Frames'
  notes: Imports
  url: https://tibble.tidyverse.org/
  repository: https://CRAN.R-project.org/package=tibble
  authors:
  - family-names: Müller
    given-names: Kirill
    email: kirill@cynkra.com
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  year: '2023'
- type: software
  title: dbplyr
  abstract: 'dbplyr: A ''dplyr'' Back End for Databases'
  notes: Imports
  url: https://dbplyr.tidyverse.org/
  repository: https://CRAN.R-project.org/package=dbplyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  - family-names: Girlich
    given-names: Maximilian
  - family-names: Ruiz
    given-names: Edgar
  year: '2023'
  version: '>= 2.0.0'
- type: software
  title: ggplot2
  abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
  notes: Imports
  url: https://ggplot2.tidyverse.org
  repository: https://CRAN.R-project.org/package=ggplot2
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Chang
    given-names: Winston
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Henry
    given-names: Lionel
  - family-names: Pedersen
    given-names: Thomas Lin
    email: thomas.pedersen@posit.co
    orcid: https://orcid.org/0000-0002-5147-4711
  - family-names: Takahashi
    given-names: Kohske
  - family-names: Wilke
    given-names: Claus
    orcid: https://orcid.org/0000-0002-7470-9261
  - family-names: Woo
    given-names: Kara
    orcid: https://orcid.org/0000-0002-5125-4188
  - family-names: Yutani
    given-names: Hiroaki
    orcid: https://orcid.org/0000-0002-3385-7233
  - family-names: Dunnington
    given-names: Dewey
    orcid: https://orcid.org/0000-0002-9415-4582
  year: '2023'
- type: software
  title: shinycssloaders
  abstract: 'shinycssloaders: Add Loading Animations to a ''shiny'' Output While It''s
    Recalculating'
  notes: Imports
  url: https://github.com/daattali/shinycssloaders
  repository: https://CRAN.R-project.org/package=shinycssloaders
  authors:
  - family-names: Sali
    given-names: Andras
    email: andras.sali@alphacruncher.hu
  - family-names: Attali
    given-names: Dean
    email: daattali@gmail.com
  year: '2023'
- type: software
  title: jsonlite
  abstract: 'jsonlite: A Simple and Robust JSON Parser and Generator for R'
  notes: Imports
  url: https://jeroen.r-universe.dev/jsonlite
  repository: https://CRAN.R-project.org/package=jsonlite
  authors:
  - family-names: Ooms
    given-names: Jeroen
    email: jeroen@berkeley.edu
    orcid: https://orcid.org/0000-0002-4035-0289
  year: '2023'
- type: software
  title: progressr
  abstract: 'progressr: An Inclusive, Unifying API for Progress Updates'
  notes: Imports
  url: https://progressr.futureverse.org
  repository: https://CRAN.R-project.org/package=progressr
  authors:
  - family-names: Bengtsson
    given-names: Henrik
    email: henrikb@braju.com
  year: '2023'
- type: software
  title: mdftracks
  abstract: 'mdftracks: Read and Write ''MTrackJ Data Files'''
  notes: Imports
  url: https://github.com/burgerga/mdftracks
  repository: https://CRAN.R-project.org/package=mdftracks
  authors:
  - family-names: Burger
    given-names: Gerhard
    email: burger.ga@gmail.com
    orcid: https://orcid.org/0000-0003-1062-5576
  year: '2023'
- type: software
  title: future
  abstract: 'future: Unified Parallel and Distributed Processing in R for Everyone'
  notes: Imports
  url: https://future.futureverse.org
  repository: https://CRAN.R-project.org/package=future
  authors:
  - family-names: Bengtsson
    given-names: Henrik
    email: henrikb@braju.com
  year: '2023'
- type: software
  title: tidyr
  abstract: 'tidyr: Tidy Messy Data'
  notes: Imports
  url: https://tidyr.tidyverse.org
  repository: https://CRAN.R-project.org/package=tidyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Vaughan
    given-names: Davis
    email: davis@posit.co
  - family-names: Girlich
    given-names: Maximilian
  year: '2023'
- type: software
  title: testthat
  abstract: 'testthat: Unit Testing for R'
  notes: Suggests
  url: https://testthat.r-lib.org
  repository: https://CRAN.R-project.org/package=testthat
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2023'
- type: software
  title: knitr
  abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
  notes: Suggests
  url: https://yihui.org/knitr/
  repository: https://CRAN.R-project.org/package=knitr
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  year: '2023'
- type: software
  title: rmarkdown
  abstract: 'rmarkdown: Dynamic Documents for R'
  notes: Suggests
  url: https://pkgs.rstudio.com/rmarkdown/
  repository: https://CRAN.R-project.org/package=rmarkdown
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Dervieux
    given-names: Christophe
    email: cderv@posit.co
    orcid: https://orcid.org/0000-0003-4474-2498
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Luraschi
    given-names: Javier
  - family-names: Ushey
    given-names: Kevin
    email: kevin@posit.co
  - family-names: Atkins
    given-names: Aron
    email: aron@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
  - family-names: Iannone
    given-names: Richard
    email: rich@posit.co
    orcid: https://orcid.org/0000-0003-3925-190X
  year: '2023'