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environment.yml
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environment.yml
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name: clinehelpr
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- alsa-lib=1.2.3=h516909a_0
- anyio=3.3.0=py36h5fab9bb_0
- argon2-cffi=20.1.0=py36h8f6f2f9_2
- async_generator=1.10=py_0
- attrs=21.2.0=pyhd8ed1ab_0
- babel=2.9.1=pyh44b312d_0
- backports=1.0=py_2
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- binutils_impl_linux-64=2.35.1=h27ae35d_9
- binutils_linux-64=2.35=h67ddf6f_30
- bleach=4.1.0=pyhd8ed1ab_0
- boost-cpp=1.74.0=h312852a_4
- brotlipy=0.7.0=py36h8f6f2f9_1001
- bwidget=1.9.14=ha770c72_0
- bzip2=1.0.8=h7f98852_4
- c-ares=1.17.1=h7f98852_1
- ca-certificates=2022.5.18.1=ha878542_0
- cairo=1.16.0=h6cf1ce9_1008
- certifi=2021.5.30=py36h5fab9bb_0
- cffi=1.14.6=py36hc120d54_0
- cfitsio=3.470=hb418390_7
- chardet=4.0.0=py36h5fab9bb_1
- charset-normalizer=2.0.0=pyhd8ed1ab_0
- contextvars=2.4=py_0
- cryptography=3.4.7=py36hb60f036_0
- curl=7.78.0=hea6ffbf_0
- dataclasses=0.8=pyh787bdff_2
- decorator=5.1.0=pyhd8ed1ab_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- entrypoints=0.3=pyhd8ed1ab_1003
- expat=2.4.1=h9c3ff4c_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.1=hba837de_1005
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.10.4=h0708190_1
- freexl=1.0.6=h7f98852_0
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=9.3.0=h6df7d76_17
- gcc_linux-64=9.3.0=hf25ea35_30
- gdk-pixbuf=2.42.6=h04a7f16_0
- geos=3.9.1=h9c3ff4c_2
- geotiff=1.6.0=h4f31c25_6
- gettext=0.19.8.1=h0b5b191_1005
- gfortran_impl_linux-64=9.3.0=hc4a2995_19
- gfortran_linux-64=9.3.0=hdc58fab_30
- giflib=5.2.1=h36c2ea0_2
- gmp=6.2.1=h58526e2_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.6=he838d99_2
- gxx_impl_linux-64=9.3.0=hbdd7822_17
- gxx_linux-64=9.3.0=h3fbe746_30
- harfbuzz=2.8.2=h83ec7ef_0
- hdf4=4.2.15=h10796ff_3
- hdf5=1.10.6=nompi_h6a2412b_1114
- icu=68.1=h58526e2_0
- idna=3.1=pyhd3deb0d_0
- immutables=0.16=py36h7f8727e_0
- importlib-metadata=4.8.1=py36h5fab9bb_0
- ipykernel=5.5.5=py36hcb3619a_0
- ipython=5.8.0=py36_1
- ipython_genutils=0.2.0=py_1
- jbig=2.1=h7f98852_2003
- jinja2=3.0.1=pyhd8ed1ab_0
- jpeg=9d=h36c2ea0_0
- json-c=0.15=h98cffda_0
- json5=0.9.5=pyh9f0ad1d_0
- jsonschema=3.2.0=pyhd8ed1ab_3
- jupyter_client=7.0.3=pyhd8ed1ab_0
- jupyter_core=4.8.1=py36h5fab9bb_0
- jupyter_server=1.11.0=pyhd8ed1ab_0
- jupyterlab=3.1.13=pyhd8ed1ab_0
- jupyterlab_server=2.8.1=pyhd8ed1ab_0
- kealib=1.4.14=hcc255d8_2
- kernel-headers_linux-64=2.6.32=he073ed8_14
- krb5=1.19.2=hcc1bbae_0
- lcms2=2.12=hddcbb42_0
- ld_impl_linux-64=2.35.1=h7274673_9
- lerc=2.2.1=h9c3ff4c_0
- libblas=3.9.0=11_linux64_openblas
- libcblas=3.9.0=11_linux64_openblas
- libcurl=7.78.0=h2574ce0_0
- libdap4=3.20.6=hd7c4107_2
- libdeflate=1.7=h7f98852_5
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.3=he6710b0_2
- libgcc-devel_linux-64=9.3.0=hb95220a_17
- libgcc-ng=11.2.0=h1d223b6_8
- libgdal=3.3.1=h8f005ca_1
- libgfortran-ng=9.4.0=h69a702a_8
- libgfortran5=9.4.0=h62347ff_8
- libgit2=1.1.1=hee63804_1
- libglib=2.68.3=h3e27bee_0
- libgomp=11.2.0=h1d223b6_8
- libiconv=1.16=h516909a_0
- libkml=1.3.0=h238a007_1014
- liblapack=3.9.0=11_linux64_openblas
- libnetcdf=4.8.0=nompi_hcd642e3_103
- libnghttp2=1.43.0=h812cca2_0
- libopenblas=0.3.17=pthreads_h8fe5266_1
- libpng=1.6.37=h21135ba_2
- libpq=13.3=hd57d9b9_0
- librsvg=2.50.7=hc3c00ef_0
- librttopo=1.1.0=h1185371_6
- libsodium=1.0.18=h36c2ea0_1
- libspatialite=5.0.1=h8694cbe_5
- libssh2=1.9.0=ha56f1ee_6
- libstdcxx-devel_linux-64=9.3.0=hf0c5c8d_17
- libstdcxx-ng=11.2.0=he4da1e4_8
- libtiff=4.3.0=hf544144_1
- libuuid=2.32.1=h7f98852_1000
- libv8=8.9.83=ha720a15_0
- libwebp-base=1.2.0=h7f98852_2
- libxcb=1.13=h7f98852_1003
- libxml2=2.9.12=h72842e0_0
- libzip=1.8.0=h4de3113_0
- lz4-c=1.9.3=h9c3ff4c_1
- make=4.3=hd18ef5c_1
- markupsafe=2.0.1=py36h8f6f2f9_0
- mistune=0.8.4=py36h8f6f2f9_1004
- nbclassic=0.3.2=pyhd8ed1ab_0
- nbconvert=5.6.1=pyhd8ed1ab_2
- nbformat=5.1.3=pyhd8ed1ab_0
- ncurses=6.2=he6710b0_1
- nest-asyncio=1.5.1=pyhd8ed1ab_0
- notebook=6.3.0=py36h5fab9bb_0
- openjdk=11.0.9.1=h5cc2fde_1
- openjpeg=2.4.0=hb52868f_1
- openssl=1.1.1o=h166bdaf_0
- packaging=21.0=pyhd8ed1ab_0
- pandocfilters=1.5.0=pyhd8ed1ab_0
- pango=1.48.7=hb8ff022_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.37=h032f7d1_0
- pexpect=4.8.0=pyh9f0ad1d_2
- pickleshare=0.7.5=py_1003
- pip=21.0.1=py36h06a4308_0
- pixman=0.40.0=h36c2ea0_0
- poppler=21.03.0=h93df280_0
- poppler-data=0.4.11=hd8ed1ab_0
- postgresql=13.3=h2510834_0
- proj=8.0.1=h277dcde_0
- prometheus_client=0.11.0=pyhd8ed1ab_0
- prompt_toolkit=1.0.15=py_1
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3deb0d_0
- pycparser=2.20=pyh9f0ad1d_2
- pygments=2.10.0=pyhd8ed1ab_0
- pyopenssl=20.0.1=pyhd8ed1ab_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyrsistent=0.17.3=py36h8f6f2f9_2
- pysocks=1.7.1=py36h5fab9bb_3
- python=3.6.13=h12debd9_1
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.6=2_cp36m
- pytz=2021.1=pyhd8ed1ab_0
- pyvcf=0.6.8=py36_0
- pyzmq=19.0.2=py36h9947dbf_2
- r-abind=1.4_5=r41hc72bb7e_1003
- r-ade4=1.7_17=r41he454529_0
- r-adegenet=2.1.4=r41hcfec24a_0
- r-ape=5.5=r41h306847c_0
- r-askpass=1.1=r41hcfec24a_2
- r-assertthat=0.2.1=r41hc72bb7e_2
- r-backports=1.2.1=r41hcfec24a_0
- r-base=4.1.0=hb67fd72_2
- r-base64enc=0.1_3=r41hcfec24a_1004
- r-bayestestr=0.11.0=r41hc72bb7e_0
- r-bit=4.0.4=r41hcfec24a_0
- r-bit64=4.0.5=r41hcfec24a_0
- r-boot=1.3_28=r41hc72bb7e_0
- r-brew=1.0_6=r41hc72bb7e_1003
- r-brio=1.1.2=r41hcfec24a_0
- r-bslib=0.3.0=r41hc72bb7e_0
- r-cachem=1.0.5=r41hcfec24a_0
- r-callr=3.7.0=r41hc72bb7e_0
- r-class=7.3_19=r41hcfec24a_0
- r-classint=0.4_3=r41h859d828_2
- r-cli=3.0.1=r41h03ef668_1
- r-clipr=0.7.1=r41hc72bb7e_0
- r-cluster=2.1.2=r41h859d828_0
- r-coda=0.19_4=r41hc72bb7e_0
- r-codetools=0.2_18=r41hc72bb7e_0
- r-colorspace=2.0_2=r41hcfec24a_0
- r-commonmark=1.7=r41hcfec24a_1002
- r-concaveman=1.1.0=r41hc72bb7e_0
- r-conditionz=0.1.0=r41hc72bb7e_1
- r-covr=3.5.1=r41h03ef668_0
- r-cpp11=0.4.0=r41hc72bb7e_0
- r-crayon=1.4.1=r41hc72bb7e_0
- r-credentials=1.3.1=r41hc72bb7e_0
- r-crosstalk=1.1.1=r41hc72bb7e_0
- r-crul=1.1.0=r41h785f33e_0
- r-curl=4.3.2=r41hcfec24a_0
- r-data.table=1.14.0=r41hcfec24a_0
- r-datawizard=0.2.0.1=r41hc72bb7e_0
- r-dbi=1.1.1=r41hc72bb7e_0
- r-deldir=0.2_10=r41h859d828_0
- r-desc=1.3.0=r41hc72bb7e_0
- r-devtools=2.4.2=r41hc72bb7e_0
- r-diffobj=0.3.4=r41hcfec24a_0
- r-digest=0.6.27=r41h03ef668_0
- r-dismo=1.3_3=r41h7f98852_0
- r-doparallel=1.0.16=r41hc72bb7e_0
- r-dosnow=1.0.19=r41hc72bb7e_1
- r-dotcall64=1.0_1=r41h859d828_0
- r-dplyr=1.0.7=r41h03ef668_0
- r-dt=0.19=r41hc72bb7e_0
- r-e1071=1.7_8=r41h03ef668_0
- r-ellipsis=0.3.2=r41hcfec24a_0
- r-enmeval=2.0.1=r41hc72bb7e_0
- r-evaluate=0.14=r41hc72bb7e_2
- r-expm=0.999_6=r41h52d45c5_0
- r-fansi=0.4.2=r41hcfec24a_0
- r-farver=2.1.0=r41h03ef668_0
- r-fastmap=1.1.0=r41h03ef668_0
- r-fields=12.5=r41h859d828_0
- r-forcats=0.5.1=r41hc72bb7e_0
- r-foreach=1.5.1=r41hc72bb7e_0
- r-fs=1.5.0=r41h03ef668_0
- r-gdata=2.18.0=r41hc72bb7e_1003
- r-generics=0.1.0=r41hc72bb7e_0
- r-gert=1.3.1=r41hbd84cd2_0
- r-ggforce=0.3.3=r41h03ef668_0
- r-ggplot2=3.3.5=r41hc72bb7e_0
- r-gh=1.3.0=r41hc72bb7e_0
- r-git2r=0.28.0=r41hf628c3e_0
- r-gitcreds=0.1.1=r41hc72bb7e_0
- r-glmnet=4.1_2=r41h859d828_0
- r-glue=1.4.2=r41hcfec24a_0
- r-gmodels=2.18.1=r41ha770c72_1003
- r-goftest=1.2_2=r41hcfec24a_1
- r-gridextra=2.3=r41hc72bb7e_1003
- r-grimport2=0.2_0=r41hc72bb7e_1
- r-gtable=0.3.0=r41hc72bb7e_3
- r-gtools=3.9.2=r41hcfec24a_0
- r-highr=0.9=r41hc72bb7e_0
- r-hms=1.1.0=r41hc72bb7e_0
- r-htmltools=0.5.1.1=r41h03ef668_0
- r-htmlwidgets=1.5.4=r41hc72bb7e_0
- r-httpcode=0.3.0=r41ha770c72_1
- r-httpuv=1.6.1=r41h03ef668_0
- r-httr=1.4.2=r41hc72bb7e_0
- r-igraph=1.2.6=r41he0372cf_1
- r-ini=0.3.1=r41hc72bb7e_1003
- r-insight=0.14.4=r41hc72bb7e_0
- r-isoband=0.2.5=r41h03ef668_0
- r-iterators=1.0.13=r41hc72bb7e_0
- r-jpeg=0.1_8.1=r41hcfec24a_1
- r-jquerylib=0.1.4=r41hc72bb7e_0
- r-jsonlite=1.7.2=r41hcfec24a_0
- r-kernsmooth=2.23_20=r41h742201e_0
- r-knitr=1.34=r41hc72bb7e_0
- r-labeling=0.4.2=r41hc72bb7e_0
- r-later=1.2.0=r41h03ef668_0
- r-lattice=0.20_44=r41hcfec24a_0
- r-lazyeval=0.2.2=r41hcfec24a_2
- r-learnbayes=2.15.1=r41hc72bb7e_1002
- r-lifecycle=1.0.0=r41hc72bb7e_0
- r-lubridate=1.7.10=r41h03ef668_0
- r-magrittr=2.0.1=r41hcfec24a_1
- r-mapproj=1.2.7=r41hcfec24a_1
- r-maps=3.3.0=r41hcfec24a_1004
- r-markdown=1.1=r41hcfec24a_1
- r-mass=7.3_54=r41hcfec24a_0
- r-matrix=1.3_4=r41he454529_0
- r-maxnet=0.1.4=r41hc72bb7e_0
- r-memoise=2.0.0=r41hc72bb7e_0
- r-mgcv=1.8_36=r41he454529_0
- r-mime=0.11=r41hcfec24a_0
- r-munsell=0.5.0=r41hc72bb7e_1003
- r-nlme=3.1_152=r41h859d828_0
- r-oai=0.3.2=r41hc72bb7e_0
- r-openssl=1.4.4=r41he36bf35_0
- r-permute=0.9_5=r41h785f33e_3
- r-pillar=1.6.2=r41hc72bb7e_0
- r-pixmap=0.4_12=r41hc72bb7e_0
- r-pkgbuild=1.2.0=r41hc72bb7e_0
- r-pkgconfig=2.0.3=r41hc72bb7e_1
- r-pkgload=1.2.1=r41h03ef668_0
- r-plyr=1.8.6=r41h03ef668_1
- r-png=0.1_7=r41hcfec24a_1004
- r-polyclip=1.10_0=r41h03ef668_2
- r-praise=1.0.0=r41hc72bb7e_1004
- r-prettyunits=1.1.1=r41hc72bb7e_1
- r-processx=3.5.2=r41hcfec24a_0
- r-progress=1.2.2=r41hc72bb7e_2
- r-promises=1.2.0.1=r41h03ef668_0
- r-proxy=0.4_26=r41hcfec24a_0
- r-ps=1.6.0=r41hcfec24a_0
- r-purrr=0.3.4=r41hcfec24a_1
- r-r6=2.5.1=r41hc72bb7e_0
- r-rangemodelmetadata=0.1.4=r41hc72bb7e_0
- r-rappdirs=0.3.3=r41hcfec24a_0
- r-raster=3.4_13=r41h03ef668_0
- r-rbison=1.0.0=r41hc72bb7e_0
- r-rcmdcheck=1.3.3=r41hc72bb7e_3
- r-rcolorbrewer=1.1_2=r41h785f33e_1003
- r-rcpp=1.0.7=r41h03ef668_0
- r-rcppeigen=0.3.3.9.1=r41h306847c_0
- r-readr=2.0.1=r41h03ef668_0
- r-rebird=1.3.0=r41hc72bb7e_0
- r-rematch2=2.1.2=r41hc72bb7e_1
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prefix: /home/btm002/miniconda3/envs/clinehelpr