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Hi, I am trying to run this command locuscompare(in_fn1 = gwas_fn, in_fn2 = eqtl_fn, title1 = 'CAD GWAS', title2 = 'Coronary Artery eQTL')
but having the persistent issue for three days.
Error in .local(drv, ...) :
Failed to connect to database: Error: Can't connect to MySQL server on 'locuscompare-us-west-2a.cvocub39nnri.us-west-2.rds.amazonaws.com' (111)
Warning message:
In rm(config) : object 'config' not found
I have already tried my best but still do not know how to run it smoothly.
I am working on ubuntu behind a corporate proxy. So, I thought at first it was a proxy issue due to the lacking of MySQL server and AWS account on my device. But, when I use it on my mac, it is working like a charm without any installation and creation of MySQL server and AWS account. However, I still need to use this tool on my work PC because of input data privacy issue.
Does it mean I need to create an AWS account and adjust the network setting in it to access MySQL server on this URL 'locuscompare-us-west-2a.cvocub39nnri.us-west-2.rds.amazonaws.com'?
Please let me know how to run this tool behind a corporate proxy.
The text was updated successfully, but these errors were encountered:
Hi, I am trying to run this command
locuscompare(in_fn1 = gwas_fn, in_fn2 = eqtl_fn, title1 = 'CAD GWAS', title2 = 'Coronary Artery eQTL')
but having the persistent issue for three days.
Error in .local(drv, ...) :
Failed to connect to database: Error: Can't connect to MySQL server on 'locuscompare-us-west-2a.cvocub39nnri.us-west-2.rds.amazonaws.com' (111)
Warning message:
In rm(config) : object 'config' not found
I have already tried my best but still do not know how to run it smoothly.
I am working on ubuntu behind a corporate proxy. So, I thought at first it was a proxy issue due to the lacking of MySQL server and AWS account on my device. But, when I use it on my mac, it is working like a charm without any installation and creation of MySQL server and AWS account. However, I still need to use this tool on my work PC because of input data privacy issue.
Does it mean I need to create an AWS account and adjust the network setting in it to access MySQL server on this URL 'locuscompare-us-west-2a.cvocub39nnri.us-west-2.rds.amazonaws.com'?
Please let me know how to run this tool behind a corporate proxy.
The text was updated successfully, but these errors were encountered: