Checked regressions pass with new QIO. Added autoconf magic for BAGEL Generated Clover Term apply. Passes those regressions too. Robert still has a few things to add and then itll be a new release.

Author: bjoo

Makefile.in

@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.9.2 from Makefile.am.
+# Makefile.in generated by automake 1.9.6 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004  Free Software Foundation, Inc.
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -91,12 +91,21 @@ AUTOCONF = @AUTOCONF@
 AUTOHEADER = @AUTOHEADER@
 AUTOMAKE = @AUTOMAKE@
 AWK = @AWK@
+BAGEL_CLOVER_CONFIG = @BAGEL_CLOVER_CONFIG@
+BAGEL_CLOVER_CXXFLAGS = @BAGEL_CLOVER_CXXFLAGS@
+BAGEL_CLOVER_DSLASH_CXXFLAGS = @BAGEL_CLOVER_DSLASH_CXXFLAGS@
+BAGEL_CLOVER_DSLASH_LDFLAGS = @BAGEL_CLOVER_DSLASH_LDFLAGS@
+BAGEL_CLOVER_DSLASH_LIBS = @BAGEL_CLOVER_DSLASH_LIBS@
+BAGEL_CLOVER_LDFLAGS = @BAGEL_CLOVER_LDFLAGS@
+BAGEL_CLOVER_LIBS = @BAGEL_CLOVER_LIBS@
 BAGEL_WILSON_DSLASH_CONFIG = @BAGEL_WILSON_DSLASH_CONFIG@
 BAGEL_WILSON_DSLASH_CXXFLAGS = @BAGEL_WILSON_DSLASH_CXXFLAGS@
 BAGEL_WILSON_DSLASH_LDFLAGS = @BAGEL_WILSON_DSLASH_LDFLAGS@
 BAGEL_WILSON_DSLASH_LIBS = @BAGEL_WILSON_DSLASH_LIBS@
 BUILD_ASQTAD_CPS_INVERTER_WRAPPER_FALSE = @BUILD_ASQTAD_CPS_INVERTER_WRAPPER_FALSE@
 BUILD_ASQTAD_CPS_INVERTER_WRAPPER_TRUE = @BUILD_ASQTAD_CPS_INVERTER_WRAPPER_TRUE@
+BUILD_BAGEL_CLOVER_APPLY_FALSE = @BUILD_BAGEL_CLOVER_APPLY_FALSE@
+BUILD_BAGEL_CLOVER_APPLY_TRUE = @BUILD_BAGEL_CLOVER_APPLY_TRUE@
 BUILD_CG_DWF_ALTIVEC_FALSE = @BUILD_CG_DWF_ALTIVEC_FALSE@
 BUILD_CG_DWF_ALTIVEC_TRUE = @BUILD_CG_DWF_ALTIVEC_TRUE@
 BUILD_CG_DWF_BLUELIGHT_FALSE = @BUILD_CG_DWF_BLUELIGHT_FALSE@
@@ -299,7 +308,13 @@ uninstall-info-am:
 #     (which will cause the Makefiles to be regenerated when you run `make');
 # (2) otherwise, pass the desired values on the `make' command line.
 $(RECURSIVE_TARGETS):
-	@set fnord $$MAKEFLAGS; amf=$$2; \
+	@failcom='exit 1'; \
+	for f in x $$MAKEFLAGS; do \
+	  case $$f in \
+	    *=* | --[!k]*);; \
+	    *k*) failcom='fail=yes';; \
+	  esac; \
+	done; \
 	dot_seen=no; \
 	target=`echo $@ | sed s/-recursive//`; \
 	list='$(SUBDIRS)'; for subdir in $$list; do \
@@ -311,15 +326,21 @@ $(RECURSIVE_TARGETS):
 	    local_target="$$target"; \
 	  fi; \
 	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
-	   || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
+	  || eval $$failcom; \
 	done; \
 	if test "$$dot_seen" = "no"; then \
 	  $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
 	fi; test -z "$$fail"
 
 mostlyclean-recursive clean-recursive distclean-recursive \
 maintainer-clean-recursive:
-	@set fnord $$MAKEFLAGS; amf=$$2; \
+	@failcom='exit 1'; \
+	for f in x $$MAKEFLAGS; do \
+	  case $$f in \
+	    *=* | --[!k]*);; \
+	    *k*) failcom='fail=yes';; \
+	  esac; \
+	done; \
 	dot_seen=no; \
 	case "$@" in \
 	  distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
@@ -340,7 +361,7 @@ maintainer-clean-recursive:
 	    local_target="$$target"; \
 	  fi; \
 	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
-	   || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
+	  || eval $$failcom; \
 	done && test -z "$$fail"
 tags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \

acinclude.m4

@@ -159,4 +159,45 @@ dnl - set the parallel compiler environment
   ]
 )
 
+AC_DEFUN(
+  PAC_BAGEL_CLOVER_LINK_CXX_FUNC,
+  [
+dnl - set local parallel compiler environments
+dnl   so input variables can be CFLAGS, LDFLAGS or LIBS
+    pac_BAGEL_CLOVER_CFLAGS="$1"
+    pac_BAGEL_CLOVER_LDFLAGS="$2"
+    pac_BAGEL_CLOVER_LIBS="$3"
+    AC_LANG_SAVE
+    AC_LANG_CPLUSPLUS
+dnl - save the original environment
+    pac_saved_CXXFLAGS="$CXXFLAGS"
+    pac_saved_LDFLAGS="$LDFLAGS"
+    pac_saved_LIBS="$LIBS"
+dnl - set the parallel compiler environment
+    CXXFLAGS="$CXXFLAGS $pac_BAGEL_CLOVER_CFLAGS"
+    LDFLAGS="$LDFLAGS $pac_BAGEL_CLOVER_LDFLAGS"
+    LIBS="$LIBS $pac_BAGEL_CLOVER_LIBS"
+    AC_TRY_LINK(
+      [
+        #include <bagel_clover.h>
+      ],
+      [
+        int argc ; char **argv ;
+	$4
+	$5
+      ],
+      [pac_bagel_clover_working=yes],
+      [pac_bagel_clover_working=no]
+    )
+    CXXFLAGS="$pac_saved_CXXFLAGS"
+    LDFLAGS="$pac_saved_LDFLAGS"
+    LIBS="$pac_saved_LIBS"
+    AC_LANG_RESTORE
+    if test "X${pac_bagel_clover_working}X" = "XyesX" ; then
+       ifelse([$6],,:,[$6])
+    else
+       ifelse([$7],,:,[$7])
+    fi
+  ]
+)